Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq10 114 1e-20 >seq10 Length=1653987 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| || || | ||| || || ||| ||||| || || ||||| ||||| || || | Sbjct 915303 GCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCC 915362 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||||||||||||||| || |||||||| ||||||| ||| | | ||| || Sbjct 915363 ATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTT 915422 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| || || ||||| | | | ||| || ||||| || || | ||||| Sbjct 915423 GTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGAT 915482 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || ||||| || || || |||||||||||||||| Sbjct 915483 GGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCATCT 915520 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || ||||| || || || |||| || Sbjct 1138162 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTC 1138221 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || || || |||||||||| ||| | || ||| |||||| | Sbjct 1138222 GAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-T 1138280 Query 39195 GATTTTCTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || | | | | | | | | || ||| || |||||| || || | ||| || | | Sbjct 1138281 GAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCT 1138340 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||| || || || ||||||||||| Sbjct 1138341 TGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1139991 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1140050 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | | Sbjct 1140051 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1140109 Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | | | | | | || ||| || |||||| || || | ||| || | || || | Sbjct 1140110 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1140169 Query 39260 TCAGCGTTTTAACAAAGATTTGCATCT 39286 ||| || || || ||||||||||||| Sbjct 1140170 TCAAGGTCTTGACGAAGATTTGCATCT 1140196 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1138396 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1138455 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | | Sbjct 1138456 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1138514 Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | | | | | | || ||| || |||||| || || | ||| || | || || | Sbjct 1138515 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1138574 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||||||||| Sbjct 1138575 TCAAGGTCTTGACGAAGATTTGCAT 1138599 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1138624 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1138683 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | | Sbjct 1138684 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1138742 Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | | | | | | || ||| || |||||| || || | ||| || | || || | Sbjct 1138743 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1138802 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||||||||| Sbjct 1138803 TCAAGGTCTTGACGAAGATTTGCAT 1138827 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1138852 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1138911 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | | Sbjct 1138912 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1138970 Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | | | | | | || ||| || |||||| || || | ||| || | || || | Sbjct 1138971 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1139030 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||||||||| Sbjct 1139031 TCAAGGTCTTGACGAAGATTTGCAT 1139055 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1139080 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1139139 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | | Sbjct 1139140 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1139198 Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | | | | | | || ||| || |||||| || || | ||| || | || || | Sbjct 1139199 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1139258 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||||||||| Sbjct 1139259 TCAAGGTCTTGACGAAGATTTGCAT 1139283 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1139535 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1139594 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | | Sbjct 1139595 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1139653 Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | | | | | | || ||| || |||||| || || | ||| || | || || | Sbjct 1139654 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1139713 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||||||||| Sbjct 1139714 TCAAGGTCTTGACGAAGATTTGCAT 1139738 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1139763 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1139822 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | | Sbjct 1139823 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1139881 Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | | | | | | || ||| || |||||| || || | ||| || | || || | Sbjct 1139882 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1139941 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || ||||||||||| Sbjct 1139942 TCAAGGTCTTGACGAAGATTTGCAT 1139966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545474357912