Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq10 114 1e-20
>seq10
Length=1653987
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| || || | ||| || || ||| ||||| || || ||||| ||||| || || |
Sbjct 915303 GCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCC 915362
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
|| || ||||||||||||||||| || |||||||| ||||||| ||| | | ||| ||
Sbjct 915363 ATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTT 915422
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|||| || || ||||| | | | ||| || ||||| || || | |||||
Sbjct 915423 GTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGAT 915482
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
| || ||||| || || || ||||||||||||||||
Sbjct 915483 GGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCATCT 915520
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| ||| || || || || || ||||| || || || |||| ||
Sbjct 1138162 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTC 1138221
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| || || || || || |||||||||| ||| | || ||| |||||| |
Sbjct 1138222 GAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-T 1138280
Query 39195 GATTTTCTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| | | | | | | | | || ||| || |||||| || || | ||| || | |
Sbjct 1138281 GAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCT 1138340
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || |||| || || || |||||||||||
Sbjct 1138341 TGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| ||||| ||| || || || || || ||||| || || || |||| || |||||
Sbjct 1139991 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1140050
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | |
Sbjct 1140051 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1140109
Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| | | | | | || ||| || |||||| || || | ||| || | || || |
Sbjct 1140110 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1140169
Query 39260 TCAGCGTTTTAACAAAGATTTGCATCT 39286
||| || || || |||||||||||||
Sbjct 1140170 TCAAGGTCTTGACGAAGATTTGCATCT 1140196
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| ||||| ||| || || || || || ||||| || || || |||| || |||||
Sbjct 1138396 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1138455
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | |
Sbjct 1138456 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1138514
Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| | | | | | || ||| || |||||| || || | ||| || | || || |
Sbjct 1138515 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1138574
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || || |||||||||||
Sbjct 1138575 TCAAGGTCTTGACGAAGATTTGCAT 1138599
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| ||||| ||| || || || || || ||||| || || || |||| || |||||
Sbjct 1138624 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1138683
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | |
Sbjct 1138684 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1138742
Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| | | | | | || ||| || |||||| || || | ||| || | || || |
Sbjct 1138743 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1138802
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || || |||||||||||
Sbjct 1138803 TCAAGGTCTTGACGAAGATTTGCAT 1138827
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| ||||| ||| || || || || || ||||| || || || |||| || |||||
Sbjct 1138852 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1138911
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | |
Sbjct 1138912 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1138970
Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| | | | | | || ||| || |||||| || || | ||| || | || || |
Sbjct 1138971 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1139030
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || || |||||||||||
Sbjct 1139031 TCAAGGTCTTGACGAAGATTTGCAT 1139055
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| ||||| ||| || || || || || ||||| || || || |||| || |||||
Sbjct 1139080 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1139139
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | |
Sbjct 1139140 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1139198
Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| | | | | | || ||| || |||||| || || | ||| || | || || |
Sbjct 1139199 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1139258
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || || |||||||||||
Sbjct 1139259 TCAAGGTCTTGACGAAGATTTGCAT 1139283
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| ||||| ||| || || || || || ||||| || || || |||| || |||||
Sbjct 1139535 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1139594
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | |
Sbjct 1139595 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1139653
Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| | | | | | || ||| || |||||| || || | ||| || | || || |
Sbjct 1139654 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1139713
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || || |||||||||||
Sbjct 1139714 TCAAGGTCTTGACGAAGATTTGCAT 1139738
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| ||||| ||| || || || || || ||||| || || || |||| || |||||
Sbjct 1139763 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTG 1139822
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || || || |||||||||| ||| | || ||| |||||| ||| | |
Sbjct 1139823 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCT 1139881
Query 39201 CTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
| | | | | | || ||| || |||||| || || | ||| || | || || |
Sbjct 1139882 TGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGG 1139941
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || || |||||||||||
Sbjct 1139942 TCAAGGTCTTGACGAAGATTTGCAT 1139966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545474357912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |