Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq10 140 2e-28 seq23 134 1e-26 seq1 127 1e-24 seq13 102 6e-17 >seq10 Length=1653987 Score = 140 bits (154), Expect = 2e-28 Identities = 172/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 44106 TCATT--CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 ||||| || || | ||| | ||| || || ||||| || |||||||||||||||||| Sbjct 915057 TCATTGACCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTA 915116 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || || || | || || |||||||| || || |||||||| ||||||||||| Sbjct 915117 ATCCGCAAGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATC 915176 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | |||||||| ||| ||||| ||| | | | || ||||| | ||| Sbjct 915177 AGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGA 915236 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| | ||| |||||||| || || | |||||| || ||||| ||||| Sbjct 915237 TTCGACCTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290 Score = 134 bits (148), Expect = 1e-26 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| |||| || | | ||||| |||||| ||| |||||| ||||||||||| ||||| Sbjct 1138144 TCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1138203 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| ||| |||| || |||||||| ||||| ||||| | || ||||| || | || Sbjct 1138204 GAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGG 1138263 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | || ||||| ||| ||||| ||| || ||| | || ||||| | || || Sbjct 1138264 AATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGACGACTCG 1138321 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1138322 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 127 bits (140), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || || || ||||| |||||| ||||||||||| Sbjct 1138366 TTGCATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTA 1138425 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| ||| |||| || |||||||| ||||| ||||| | || ||||| || Sbjct 1138426 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1138485 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| ||| ||||| ||| || ||| | || ||||| | Sbjct 1138486 GGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGAC 1138543 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1138544 GACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599 Score = 127 bits (140), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || || || ||||| |||||| ||||||||||| Sbjct 1138594 TTGCATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTA 1138653 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| ||| |||| || |||||||| ||||| ||||| | || ||||| || Sbjct 1138654 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1138713 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| ||| ||||| ||| || ||| | || ||||| | Sbjct 1138714 GGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGAC 1138771 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1138772 GACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827 Score = 127 bits (140), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || || || ||||| |||||| ||||||||||| Sbjct 1138822 TTGCATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTA 1138881 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| ||| |||| || |||||||| ||||| ||||| | || ||||| || Sbjct 1138882 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1138941 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| ||| ||||| ||| || ||| | || ||||| | Sbjct 1138942 GGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGAC 1138999 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1139000 GACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055 Score = 127 bits (140), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || || || ||||| |||||| ||||||||||| Sbjct 1139050 TTGCATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTA 1139109 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| ||| |||| || |||||||| ||||| ||||| | || ||||| || Sbjct 1139110 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1139169 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| ||| ||||| ||| || ||| | || ||||| | Sbjct 1139170 GGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGAC 1139227 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1139228 GACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283 Score = 127 bits (140), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || || || ||||| |||||| ||||||||||| Sbjct 1139505 TTGCATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTA 1139564 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| ||| |||| || |||||||| ||||| ||||| | || ||||| || Sbjct 1139565 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1139624 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| ||| ||||| ||| || ||| | || ||||| | Sbjct 1139625 GGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGAC 1139682 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1139683 GACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738 Score = 127 bits (140), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || || || ||||| |||||| ||||||||||| Sbjct 1139733 TTGCATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTA 1139792 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| ||| |||| || |||||||| ||||| ||||| | || ||||| || Sbjct 1139793 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1139852 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| ||| ||||| ||| || ||| | || ||||| | Sbjct 1139853 GGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGAC 1139910 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1139911 GACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966 Score = 127 bits (140), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || || || ||||| |||||| ||||||||||| Sbjct 1139961 TTGCATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTA 1140020 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| ||| |||| || |||||||| ||||| ||||| | || ||||| || Sbjct 1140021 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1140080 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| ||| ||||| ||| || ||| | || ||||| | Sbjct 1140081 GGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGAC 1140138 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1140139 GACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194 Score = 123 bits (136), Expect = 2e-23 Identities = 171/236 (72%), Gaps = 5/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || || || || ||||| |||||| ||||||||||| Sbjct 1139278 TTGCATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTA 1139337 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| ||| |||| || |||||||| ||||| ||||| | || ||||| || Sbjct 1139338 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1139397 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | || | || ||||| ||| ||||| ||| || ||| | || ||||| | Sbjct 1139398 -GGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGT--CAATCGTGTCCGAC 1139454 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | |||||||||||| || || | |||||| |||||||||||||| Sbjct 1139455 GACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510 Score = 116 bits (128), Expect = 3e-21 Identities = 168/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | ||| || || ||||| || ||||||||||||||||||||| Sbjct 915288 CATACCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATC 915347 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || || | || || ||||| || || |||||||| | |||||| || || | Sbjct 915348 CGCAAGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGG 915407 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||| ||||| ||| ||||| |||| || ||| | || ||||| | || Sbjct 915408 GGGAATACCCTCCTTGTCCTGAATCTT-GGCTTTGACATTGT--CAATCGTGTCCGATGA 915464 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || ||||| ||||| || ||||| || ||||||||||| Sbjct 915465 CTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 >seq23 Length=1006473 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||||||||||||||||||| | ||| | || || Sbjct 106611 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCG 106552 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| || ||||| |||| || | |||||||| || Sbjct 106551 AGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 106492 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||||| || || ||||| | || |||||||| Sbjct 106491 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 106432 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||||| || ||||| |||||||||||| |||| Sbjct 106431 CCCGTAAGAGTCTTGACGAAGATTTGCCTGAT 106400 >seq1 Length=554179 Score = 127 bits (140), Expect = 1e-24 Identities = 155/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||||||||||||||| ||||| | ||| | || || Sbjct 255699 ACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCCTCG 255640 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||| || || || | || | |||||||| || Sbjct 255639 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCTTGG 255580 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | || ||||||| || || ||||| | || || ||||| Sbjct 255579 ATCTT-GGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTT 255521 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 |||||||||||||| ||||||||||||| Sbjct 255520 GCCCGTGAGGGTCTTGACGAAGATTTGCA 255492 >seq13 Length=1203898 Score = 102 bits (112), Expect = 6e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| |||| || | | ||||| |||||| ||| |||||| ||||||||||| ||||| Sbjct 755880 TCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 755821 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 | ||| | || || |||||||| ||||| ||||| | || ||||| |||| || Sbjct 755820 TCGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGG 755761 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | || ||||| ||| ||||| ||| || ||| | || ||||| | || || Sbjct 755760 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGT--CAATCGTGTCCGACGACTCG 755703 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCT 44321 || || | |||||||||||| || || | ||||| Sbjct 755702 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCT 755669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990294702808