Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq23 172 1e-37 seq10 172 1e-37 seq1 159 8e-34 seq13 122 2e-22 >seq23 Length=1006473 Score = 172 bits (190), Expect = 1e-37 Identities = 162/205 (79%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || ||||||||||||||||| || || ||| Sbjct 106406 CAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 106465 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct 106466 ACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAA 106525 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || |||||||| ||||| | ||| | |||||||| ||| || Sbjct 106526 CGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTTTGGCCGATTACAACATC 106585 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 106586 CAAAAGGAGTCGACCCTCCA-CTTG 106609 >seq10 Length=1653987 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || || |||||||| |||||||| ||| ||| ||| Sbjct 915287 CAGATCTTTGTCAAGACCTTGACCGGTAAGACGATCACGCTCGAGGTCGAATCCTCGGAC 915228 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| ||||| |||||||| || ||||| Sbjct 915227 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAGCAG 915168 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| ||||| |||||||| ||||| | || ||||| ||||| ||| || Sbjct 915167 CGATTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACGCTTGCGGATTACAACATC 915108 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| || || || || ||||| || ||| Sbjct 915107 CAAAAGGAGTCGACCCTTCATCTCGTCTTG 915078 Score = 154 bits (170), Expect = 4e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| || || || || |||||||||||||| || || ||| Sbjct 915515 CAAATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCATCGGAC 915456 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| |||||||||||||| || || || || || ||||| || Sbjct 915455 ACGATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAACAG 915396 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || ||||||||||| ||||| | || ||||| ||||| ||| || Sbjct 915395 CGTCTCATCTTTGCGGGCAAACAGCTCGAGGATGGCCGTACGCTTGCGGATTACAACATC 915336 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| || || || || ||||| || ||| Sbjct 915335 CAAAAGGAGTCGACCCTTCATCTCGTCTTG 915306 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1138596 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1138537 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 1138536 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1138477 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1138476 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1138417 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1138416 CAGAAGGAGTCGACGCTCCATCTCGT 1138391 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1138824 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1138765 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 1138764 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1138705 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1138704 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1138645 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1138644 CAGAAGGAGTCGACGCTCCATCTCGT 1138619 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1139052 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1138993 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 1138992 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1138933 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1138932 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1138873 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1138872 CAGAAGGAGTCGACGCTCCATCTCGT 1138847 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1139280 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1139221 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 1139220 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1139161 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1139160 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1139101 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1139100 CAGAAGGAGTCGACGCTCCATCTCGT 1139075 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1139735 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1139676 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 1139675 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1139616 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1139615 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1139556 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1139555 CAGAAGGAGTCGACGCTCCATCTCGT 1139530 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1139963 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1139904 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 1139903 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1139844 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1139843 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1139784 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1139783 CAGAAGGAGTCGACGCTCCATCTCGT 1139758 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1140191 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1140132 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 1140131 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1140072 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1140071 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1140012 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1140011 CAGAAGGAGTCGACGCTCCATCTCGT 1139986 Score = 134 bits (148), Expect = 3e-26 Identities = 154/206 (75%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1139507 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1139448 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || ||| |||||||| Sbjct 1139447 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCG-ACCAGCAA 1139389 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1139388 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1139329 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1139328 CAGAAGGAGTCGACGCTCCATCTCGT 1139303 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||| || || || || || || ||| Sbjct 1138368 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGAC 1138309 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 1138308 ACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1138249 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||| || | ||||| ||||| || ||| || Sbjct 1138248 CGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAACATC 1138189 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 1138188 CAGAAGGAGTCCACCCTTCA-CTTG 1138165 >seq1 Length=554179 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || || |||||||||||||| || || ||| Sbjct 255494 CAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCCGAC 255553 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||||| ||||| || ||||| ||||| ||||| || ||||| ||| Sbjct 255554 ACGATCGACAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAACAA 255613 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || | ||||| || ||| || Sbjct 255614 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCCGACTACAACATC 255673 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 255674 CAAAAGGAGTCGACCCTTCA-CTTG 255697 >seq13 Length=1203898 Score = 122 bits (134), Expect = 2e-22 Identities = 138/184 (75%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || ||||| || || || || || || ||||| || || || ||||| Sbjct 755677 ACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGACACGATTGACAATGTCAAGGCC 755736 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || || || || |||||||||||||| ||||||||||| || Sbjct 755737 AAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAACGACTCATCTTCGCCGGCAAG 755796 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||||||||| | || | ||||| || ||| |||| || || || || || || Sbjct 755797 CAGCTCGAAGATGGTCGCACCCGAGCCGACTACAACATCCAGAAGGAGTCCACCCTTCA- 755855 Query 178125 CTTG 178128 |||| Sbjct 755856 CTTG 755859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730829852656