Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq10 156 4e-33 seq13 127 2e-24 seq1 114 1e-20 seq23 104 2e-17 >seq10 Length=1653987 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||||| || || ||| ||||||||| ||||| ||||||| | Sbjct 1138145 CCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1138204 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || ||||| | |||| Sbjct 1138205 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138264 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1138265 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1138323 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1138324 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 1138373 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138432 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || ||||| | |||| Sbjct 1138433 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138492 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1138493 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1138551 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1138552 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 1138601 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138660 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || ||||| | |||| Sbjct 1138661 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138720 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1138721 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1138779 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1138780 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 1138829 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138888 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || ||||| | |||| Sbjct 1138889 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138948 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1138949 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1139007 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1139008 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 1139057 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139116 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || ||||| | |||| Sbjct 1139117 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139176 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1139177 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1139235 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1139236 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 1139512 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139571 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || ||||| | |||| Sbjct 1139572 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139631 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1139632 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1139690 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1139691 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 1139740 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139799 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || ||||| | |||| Sbjct 1139800 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139859 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1139860 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1139918 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1139919 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 1139968 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1140027 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || ||||| | |||| Sbjct 1140028 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1140087 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1140088 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1140146 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1140147 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194 Score = 143 bits (158), Expect = 2e-29 Identities = 171/228 (75%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 1139285 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139344 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || || || || |||| || |||| Sbjct 1139345 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGT-CGGGGGA 1139403 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | ||||| |||||| || Sbjct 1139404 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1139462 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| || || |||| ||||| ||||| || ||||| Sbjct 1139463 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || || ||||| || || |||||| || ||||| || || | Sbjct 915292 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915351 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || |||||||| ||||| || || || || ||||||||||| | |||| Sbjct 915352 AGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGA 915411 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || |||| || | | | ||||| ||||| || Sbjct 915412 ATACCCTCCTTGTCC-TGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGAC 915470 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || ||||| || ||||| || || || ||||| Sbjct 915471 CTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || || ||||| || || |||||| || ||||| || || | Sbjct 915064 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915123 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| || ||||| |||| ||||| || || | || Sbjct 915124 AGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGG 915183 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| | || || | ||| | | | ||||| || || || Sbjct 915184 ATGCCTTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGATTCGAC 915242 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| ||||| |||| ||||| || || |||||||| Sbjct 915243 CTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290 >seq13 Length=1203898 Score = 127 bits (140), Expect = 2e-24 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||||| || || ||| ||||||||| ||||| ||||||| Sbjct 755879 CCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCT 755820 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||||| | || |||||||||||||||||||| || || || || ||||| | |||| Sbjct 755819 CGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGA 755760 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | || | | | ||||| |||||| || Sbjct 755759 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 755701 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846 || | ||| ||||| || || |||| |||| Sbjct 755700 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCT 755669 >seq1 Length=554179 Score = 114 bits (126), Expect = 1e-20 Identities = 163/227 (72%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | |||| || || || |||||| || ||||| ||||||| Sbjct 255717 CCACCGCGCAGGCGAAGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 255658 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || |||||||||||||||||||| || || || |||||||| | || Sbjct 255657 AAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGG 255598 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | || | || |||| ||| | | | |||||| ||||| || Sbjct 255597 ATGCCTTCCTTGT-CTTGGATCTTGGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGAC 255539 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCA 41861 ||| | || || || || ||||| || ||||| ||||| || |||| Sbjct 255538 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 255492 >seq23 Length=1006473 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || |||||| || ||||| || |||| Sbjct 106629 CCACCTCGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCC 106570 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || |||||||||||||||||||| |||| || || ||||| | || Sbjct 106569 AAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGG 106510 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | || | || || | ||| | | | |||||| |||||| || Sbjct 106509 ATGCCTTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 106451 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || ||||| || ||||| ||||| || ||| || Sbjct 106450 CTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 106402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303861308800