Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900008665.1_202016-07-08] 5,182 sequences; 26,789,479 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq463 251 7e-62 >seq463 Length=11792 Score = 251 bits (278), Expect = 7e-62 Identities = 733/1123 (65%), Gaps = 23/1123 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| ||||||||| || || || ||| | || || || |||| | Sbjct 3002 TACAACTACTTTGGCTTCAAAACGCTCGAACGCTCCTACTTGCTTCGCATCGACGGCAAG 3061 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| |||| || ||||| |||||| Sbjct 3062 GTCGCCGAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 3121 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | || |||| | | | || || | | | || | || |||| ||| Sbjct 3122 ATTGAGCGCGTCTTGCAGTCGTACA---ACCTTATGTCCGAGCGCTACTTTACCCACGCC 3178 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || || ||||||||| | Sbjct 3179 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTC 3238 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| || || || || |||| ||||| || ||| || ||| |||| Sbjct 3239 ACGATGAAGGATGATTCGATTGAAGGCATTTACGACACGCTTAAGACGTGCGCGCTCATC 3298 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 3299 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTAC 3358 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || || ||| ||| |||||| | ||||| |||||||| |||| ||||||| Sbjct 3359 ATCGCCGGCACGAACGGCTACTCGAACGGCATTGTCCCCATGCTCCGTGTCTACAACAAC 3418 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 3419 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 3478 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||||||||| || Sbjct 3479 GAGCCGTGGCACGCCGACGTCTTCGAATTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 3538 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| || |||||| | || || ||||| ||| | || Sbjct 3539 GAAGTTCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTTTTCATGGAGCGT 3598 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || ||| ||| || || ||| ||| ||||| || ||| Sbjct 3599 GTCGAGGCCGCCGGCGATTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTACACGAA 3658 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 || | ||| | || | ||||| | |||||| | ||||| |||| | Sbjct 3659 GTCTATGGCGAGGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAG 3718 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 || || || ||||| ||| | ||| | || | ||||| || || || Sbjct 3719 AAAACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGC 3778 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | || | || | | ||| ||| | | ||| || || ||||| || | || || Sbjct 3779 AACCCTTTTATGCTCTACAAAGACGCCGCGAACAAGAAATCGAACCAAAAGAATCTTGGC 3838 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 ||||||| ||||| |||||||||||||| ||||||| | | ||||||||| Sbjct 3839 ACGATCAAGTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGC 3898 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCT 94674 || || || ||| ||| ||| ||| || | | ||| | | || | | ||| | Sbjct 3899 GCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAG--GAC--GGCGTGT 3953 Query 94675 ACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCT 94733 || ||| | | | || | ||| | || || ||| | | || ||| | Sbjct 3954 ACGACTT--TAAGAAGTTGCACGAGGTCGTCAAGGTCG---------TCGCTTTCAACTT 4002 Query 94734 GAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAA 94793 |||| | | |||||| |||| ||| |||||| |||||| | ||||| ||| | Sbjct 4003 GAACCGCATCATCGACGTCAACTACTATCCCGTCATCGAGGCGCAAAACTCCAACTTCCG 4062 Query 94794 GCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| |||| |||||| Sbjct 4063 CCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGACGCG 4105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494691154304720