Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900008665.1_202016-07-08] 5,182 sequences; 26,789,479 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq18 387 2e-102 seq12 170 2e-37 seq106 161 1e-34 seq224 105 8e-18 >seq18 Length=145174 Score = 387 bits (428), Expect = 2e-102 Identities = 580/824 (70%), Gaps = 0/824 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 121786 TCACCGGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 121727 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | ||||| Sbjct 121726 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTCGGA 121667 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| ||| Sbjct 121666 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAG 121607 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || ||||| || ||||| |||||||| |||||||||||| |||| ||| Sbjct 121606 TCGCGAAGGACCTTCTCGACGGGTTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 121547 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || ||||| || ||||| || | || ||| | | ||| || || Sbjct 121546 TCGAAGCGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 121487 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | |||||||| || ||||| || || || || Sbjct 121486 TCGATGGTAGTCTGCGCGGCCGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 121427 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 121426 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 121367 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 121366 GCGACGAAGTGAGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 121307 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | |||||| | || | || ||||| ||||| Sbjct 121306 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 121247 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || ||||| ||||| |||||| | ||| || | | ||||| ||||| ||| Sbjct 121246 CCTCCTCCGAGATCAAAGATGAGGACGTTCTTCTCGCCGACGGTCTTCTTGTCGAGGCCG 121187 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||||||||| || ||| ||||| | || Sbjct 121186 TAAGCGATGGCGGCGGCGGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 121127 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 121126 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 121067 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | ||||| || | || ||| | || ||||| || || Sbjct 121066 ACGGCGTTGGAGACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTCAGCAGG 121007 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 | ||| ||||| || || || | | ||||| || || || || Sbjct 121006 ATCATGGATGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCC 120963 >seq12 Length=155471 Score = 170 bits (188), Expect = 2e-37 Identities = 524/807 (65%), Gaps = 15/807 (2%) Strand=Plus/Minus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 69725 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 69666 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| | | || || | || || | | || || || ||||| Sbjct 69665 CGACTTGTTCAACTGTCGGCCACCGAAGAACTCGGAAACGAGCGACTGGATCTTGGGGAT 69606 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 69605 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 69546 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 | || || ||||| || || | | | | ||||| | | | |||| Sbjct 69545 TTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 69487 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | ||||| ||||||| || || | |||| || || | | | | ||| || | | Sbjct 69486 CGAAACGAGCACGGGAGATCGAGGCGGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 69427 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 69426 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 69367 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| ||||||||||||| |||| || || ||| | || | | |||||| | Sbjct 69366 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 69307 Query 7431 CAGAGAAGTGT--CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| | || | | | | || || || |||||||||||||| || || || Sbjct 69306 TCTTGAAGTGCTCCAAAAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 69249 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 69248 AGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 69189 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACG---------TTCGTATCGTCGTCTTTGTTCTT 7599 || || || || || || ||||| ||| ||| || | || || || Sbjct 69188 TCCTCCTCCAAGATCGAAGATGAGAACGAGCTTCTCCTTCTTAGACTTCTCGGTGGCCTC 69129 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | | |||||||| ||||| || || || || || || || || ||||| || || || Sbjct 69128 ACCCAGACCGTAGGCGATGGCAGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 69069 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 69068 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 69009 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 69008 GACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 68949 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| ||| ||||| || || ||||| Sbjct 68948 CTTGGAAAGGACCATGGACGAGATCTC 68922 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 68668 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 68612 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 68611 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 68552 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 68551 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 68519 >seq106 Length=64772 Score = 161 bits (178), Expect = 1e-34 Identities = 248/353 (70%), Gaps = 3/353 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 21672 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 21731 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 21732 TCTTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 21791 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 21792 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCAGTGGGCTCG 21848 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | || || ||| |||||| || || || || | || || || |||||||||||| Sbjct 21849 TTGACAACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 21908 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 21909 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 21968 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | || ||| | || ||||| ||| | || ||| | || ||||| || Sbjct 21969 TAGGCCTCGGCGGTCTCCTTCATCTTGCCCAAAATCATGGCCGAGATCTCCTC 22021 >seq224 Length=32578 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||||| || || || || || || ||||| | ||| || || || Sbjct 15214 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTAATGACACGGAGCACGTCAAGA 15155 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || || | || || || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 15154 CCCGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 15095 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 15094 ACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 15035 Query 7781 TTG 7783 ||| Sbjct 15034 TTG 15032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635091659272880