Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900008665.1_202016-07-08] 5,182 sequences; 26,789,479 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq158 127 2e-24 seq42 125 6e-24 seq75 122 8e-23 seq428 113 4e-20 seq9 113 4e-20 seq463 95.1 1e-14 >seq158 Length=48607 Score = 127 bits (140), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| |||||| | || || || || || || || || || ||||| || || | ||| Sbjct 44540 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 44599 Query 24765 ACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || |||| || || || |||||||||||| ||||| || || || || || Sbjct 44600 ACACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 44658 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || ||||| |||||| | | | || | || || ||| Sbjct 44659 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 44718 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || |||||||| | || |||| || || Sbjct 44719 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTGCGTGGTGG 44765 >seq42 Length=107705 Score = 125 bits (138), Expect = 6e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| |||||| | || || || || || || || || || ||||| || || | |||| Sbjct 55166 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 55225 Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 ||| | || |||| || || || |||||||||||| ||||| || || || || || | Sbjct 55226 CACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 55284 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||||||||| || ||||| |||||| | | | || | || || |||| Sbjct 55285 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 55344 Query 24885 TTCAAAAGGAATCGACACTACACTTGGT 24912 | |||||||| ||||| || |||||||| Sbjct 55345 TCCAAAAGGAGTCGACCCTCCACTTGGT 55372 >seq75 Length=81244 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || || |||||||| || || || | Sbjct 7283 ATGCAGATCTTTGTCAAGACGCTGACGGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 7342 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || |||||||| || || || || || || || || || Sbjct 7343 GACACGATCGACAACGTCAAGAC-CAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCA 7401 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | ||||| || || || ||||| |||||| | | | | ||||| || Sbjct 7402 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 7461 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || ||||||||| |||| Sbjct 7462 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 7497 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || ||||| || || || || || |||||||| || || | | Sbjct 7054 GATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTC 7113 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || || |||||||| ||||| ||||| || || || || | Sbjct 7114 GGACACGATCGACAACGTCAAGAC-CAAGATCCAGGACAAGGAAGGCATTCCCCCAGACC 7172 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || || |||||||| || || || ||||| |||||| | | | | ||||| | Sbjct 7173 AGCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 7232 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | || || ||||| ||||| || ||||||||| |||| Sbjct 7233 ATATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 7269 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || || |||||||| || || | | Sbjct 7511 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 7570 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || ||||| || ||||| ||||| || || || || || Sbjct 7571 GACACGATCGACAACGTCAAGAC-CAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 7629 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||| || || || ||||| |||||| | | | | ||||| || Sbjct 7630 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCGGATTACAA 7689 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || ||||||||| |||| Sbjct 7690 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 7725 >seq428 Length=13982 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || |||||||| || || || | Sbjct 13728 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 13669 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 13668 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 13609 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 13608 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 13549 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 13548 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 13519 >seq9 Length=159304 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| | || || || ||||| || || || |||||||| || || || | Sbjct 350 GATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTC 291 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 290 GGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCA 231 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 230 GCAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 171 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || |||||||| Sbjct 170 TATCCAGAAGGAGTCGACGCTGCACTTGGT 141 >seq463 Length=11792 Score = 95.1 bits (104), Expect = 1e-14 Identities = 791/1255 (63%), Gaps = 84/1255 (7%) Strand=Plus/Minus Query 138789 CGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC 138848 || ||||| ||| | | ||| || || ||| || |||| |||||| || ||||| Sbjct 4198 CGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTACGCGCCTC 4139 Query 138849 GGCGCTCTCGTACGGCAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCA 138907 || ||| ||||||| || || | ||||||||||||| || |||||||| || | Sbjct 4138 GGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCCGA 4080 Query 138908 CTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATA---GGATAATAGT 138964 |||| ||||| ||||| | || || ||||||| || |||| ||||| |||| Sbjct 4079 TGCCGATGGGGCGGTGGCGGAAGTTGGAG--TTTTGCGCCT-CGATGACGGGATAGTAGT 4023 Query 138965 TTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT- 139023 | || |||||||| ||| || || |||| ||||| | || | | | | | Sbjct 4022 TGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTT-GACGACCTCGTGCAACTTC 3964 Query 139024 TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACG-TCGACAAATTTGTTGACACAAAT 139082 | ||| ||||| ||| ||| | || || | ||| ||| | | | | Sbjct 3963 TTAAAGTCGTACACGCC------GTCCTTGATGAAGCTCGGCAA---------CGCGA-T 3920 Query 139083 CGAGGCTATGTTGCACACCGC-CACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCAC 139141 |||||| | |||||| || || |||| |||| || | ||| |||| || |||| | Sbjct 3919 CGAGGCCAAGTTGCAGACGGCGCACT-CGTCCGGCGCCGAGTACTCGATGATCTCGGTGC 3861 Query 139142 ACAAATTACTAC-ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCA 139200 ||| || | || |||||||||| || | ||| | ||| || ||| ||| || Sbjct 3860 ACAGGTT-CGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCG 3802 Query 139201 TCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAAC 139260 |||||||| |||||| | || |||||||||| || || | || | ||| | | | Sbjct 3801 TCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGT--ACC 3744 Query 139261 AAGTCCCTAGCTTGTATTTGACGCACGTAAAGTT--CGTCGCGC-----------TCGTA 139307 || ||||| ||| ||| | | ||| | | |||| ||||| Sbjct 3743 AA------AGCTT----TTG-CGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTA 3695 Query 139308 CTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTC 139367 || ||| | | || ||| || || ||| | || || || | | | | Sbjct 3694 TTTCTCGAACAAGGCGCGGAACTCCTCGCCATAGACTTCGTGTAGGCCGGGGGCTTCGGC 3635 Query 139368 AGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAAT 139427 || || | ||| | ||| ||||| |||| ||| ||| |||||| ||||| ||||| Sbjct 3634 GGGGCAGAAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAAT 3575 Query 139428 CCACAAAGCGAACAGCAAATCGCG--CGCCTTCTTATCTTCCGAACCCATGTTACGTTTC 139485 ||| | || || | | ||| || ||| ||| | ||| || ||| || | Sbjct 3574 CCAGAGCGCAAAGAAGAGATCACGAGCGCGAACTT--CCTCCTTGCCGTGGTTC--TTGC 3519 Query 139486 --ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGC 139543 | || ||||| || || ||||| |||||||| || || || ||||| || | || | Sbjct 3518 GAAGGTCCAGGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTC 3459 Query 139544 CTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACA 139600 | || ||| |||||||| ||||||| || | | || ||| | || || | || Sbjct 3458 CGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCA 3399 Query 139601 TCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAGCT 139656 | || | | ||| ||| ||||| |||| |||| ||| | || ||| Sbjct 3398 TGGGGACAATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCG---- 3343 Query 139657 CGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCG 139716 |||| || || | | | ||||| || ||| | ||||| || | |||| || Sbjct 3342 CGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCA--CG 3285 Query 139717 -CGTAAT-GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774 | ||| || ||||| || ||| || || |||| |||||||||||| || || | Sbjct 3284 TCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGG 3225 Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACA 139834 ||||||| ||||| | ||| ||||| || || || || ||||| || || Sbjct 3224 ACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGT 3165 Query 139835 TTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATAC 139894 | | ||||| | | ||||| | | | ||| | |||| || |||||||| | Sbjct 3164 AGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGC 3105 Query 139895 CGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttt 139954 |||| | ||| ||||| ||||| ||||| |||||||| ||| ||| ||||| Sbjct 3104 CGACGGCGACACGCATGAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAA 3045 Query 139955 tCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007 || || | ||| || || || ||| |||||||||| | ||| ||||||| Sbjct 3044 GCAAGTAGGAGCGT--TCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 2992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449868457882960