Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900008665.1_202016-07-08] 5,182 sequences; 26,789,479 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq463 446 2e-120 seq5 95.1 1e-14 seq3 86.0 7e-12 >seq463 Length=11792 Score = 446 bits (494), Expect = 2e-120 Identities = 781/1126 (69%), Gaps = 12/1126 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||||| ||||||||||| || ||||| | ||| ||| || | ||| Sbjct 3087 TCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGTCTTGCAGTCGTACA 3146 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| | || | ||| || ||||| ||||||| || ||||||||||| ||| Sbjct 3147 ACCTTATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 3206 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 |||||||| | ||| ||||||||| || | ||||||||||| ||||| |||| Sbjct 3207 CTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATGATTCGATTGAAGGCA 3266 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 | ||||| ||||| ||| |||||||| |||||||||| |||| |||||||| | Sbjct 3267 TTTACGACACGCTTAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 3326 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA-C 19414 | | || ||||| ||| || | ||| || |||||||| || ||| | Sbjct 3327 GCATCCACAACATCCGCGCGACCGGCTCCTACATCGCCGGCACGAACGGC-TACTCGAAC 3385 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 || || ||||| |||||||| |||| ||||||||| || | |||||| |||| || ||| Sbjct 3386 GGCATTGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGC 3445 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| || || | ||||| |||||||||||||| |||||||| |||||| | || Sbjct 3446 AACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCCGACGTCTTCGAA 3505 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||||| || || ||| |||||| || | ||||| | ||| ||| || |||||| Sbjct 3506 TTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTTCGCGCTCGTGATCTCTTCTTT 3565 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 || | |||||||| || || ||||||||| || ||| | || || |||| || Sbjct 3566 GCGCTCTGGATTCCCGATCTTTTCATGGAGCGTGTCGAGGCCGCCGGCGATTGGCCTCTC 3625 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | ||||| |||| ||| ||||||| ||| ||||| ||||||| |||| | ||| Sbjct 3626 TTCTGCCCCGCCGAAGCCCCCGGCCTACACGAAGTCTATGGCGAGGAGTTCCGCGCCTTG 3685 Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGG 19774 | | || |||| | ||||||| |||||| | ||| || | | | ||| Sbjct 3686 TTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGATCCCCGCGCAAAAGCTTTGG 3745 Query 19775 GACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 | |||| | || || ||||||||| || |||| || | ||| |||||| ||||| Sbjct 3746 TA-CGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCTTTTATGCTCTACAAAGACGC 3804 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 ||||||| || || || || ||||| | ||| ||||||||||||| |||||||| || Sbjct 3805 CGCGAACAAGAAATCGAACCAAAAGAATCTTGGCACGATCAAGTCGTCGAACCTGTGCAC 3864 Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953 || ||||| ||| || |||||||||| ||||| || || |||| || | Sbjct 3865 CGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGATCGC 3924 Query 19954 CCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCG 20013 |||||| ||| |||||| | | | ||||||| || ||| ||||||| | Sbjct 3925 GTTGCCGAGCTTCATCAAGGACGGCGTGTACGACTTTAAGAAGTTGCACGAGGTCGTCAA 3984 Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCG--ACCGAGGC 20070 ||||||| | || |||| ||| ||||||| |||| || |||| | ||| Sbjct 3985 GGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGA--- 4041 Query 20071 GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGA 20130 ||||| || || || | |||||||| || |||| ||||| || || || || ||||| Sbjct 4042 GGCGCAAAACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGA 4101 Query 20131 CGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGG 20189 || |||||| || ||| | | ||||| ||| ||||||| ||||||||||| Sbjct 4102 CGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGTAAGCTCAACAAGC 4160 Query 20190 GCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||| || | |||||||| || || | |||||||| Sbjct 4161 AAATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 4206 Score = 425 bits (470), Expect = 6e-114 Identities = 790/1148 (69%), Gaps = 15/1148 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| |||||| Sbjct 4197 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTACGCGCC 4141 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 4140 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCC 4082 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAA 78950 ||| |||| || |||||||| | |||| ||| | ||||||| | |||| || | Sbjct 4081 GATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTG---CGCCTCGATGACGGGATAGTA 4025 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||| ||| | ||||||| ||||||| ||| || Sbjct 4024 GTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTT 3965 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 || || | | | ||||| |||||| |||| | | ||| |||| ||||| Sbjct 3964 CTTAAAGTCGTACACGCCGTCCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 3906 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || ||||||||| || ||||||| || ||||||| Sbjct 3905 AGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGACT 3846 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| ||||| | ||||| ||||| |||| ||| |||||| |||||| ||| Sbjct 3845 TGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCGTCTTTGTAGAGCATAA 3786 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | || || || ||||| | |||| ||| ||| | | | || ||| Sbjct 3785 AAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGCGGGGA 3726 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 |||||| || |||| |||| || | |||| || ||| |||| | Sbjct 3725 TCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAACTCCTCGC 3666 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | ||||| ||| ||| ||||| | || |||| || || | Sbjct 3665 CATAGACTTCGTGTAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCAATCGCCGGCGG 3606 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || ||||||||| || || || ||||| || || |||||| || || | Sbjct 3605 CCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGC 3546 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| |||||| || || || || || || | || ||||||||||| Sbjct 3545 GAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAATTCGAAGACGTCGGCGTGCC 3486 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 3485 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 3426 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || ||||||||| | || ||||||||||| || ||||||| | | ||||||||| | Sbjct 3425 GCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTCGTGC 3366 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || ||| | ||| |||| || ||||| | | | ||||| || |||| Sbjct 3365 CGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 3306 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||| ||||| ||||| ||||| || ||||| || |||| Sbjct 3305 TCTTGGAGATGAGCGCGCACGTCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 3246 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||||||| ||| ||| | ||| |||| ||| |||||||||||||| | Sbjct 3245 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 3186 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| || ||| | | | ||| || | ||||| || | ||||||| Sbjct 3185 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCT 3126 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908 | ||||| |||||||||||||| ||||| ||||||| | || || |||||| ||| Sbjct 3125 CAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGTTGCGGGCGT-TCG 3067 Query 79909 CCGACATT 79916 |||| || Sbjct 3066 GCGACCTT 3059 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 ||| || || ||||| ||||||||||||||||| || || ||||||| ||||| | ||| Sbjct 5006 GGCCCGCGTGCGCAAGTAGTACATGCCCGTCTTCAGTCCTCTCTTCCAGCCGTAGAAGTG 4947 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| | ||| || || | |||||| ||||| || ||||| Sbjct 4946 CATCGACGTGAGCTGCGCCATCGTTGGGCTCGACAAGTGGATGTTAAGCGATTGCGACTG 4887 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||| ||| | ||||| |||||||| | || |||||| | | |||||||| | |||||| Sbjct 4886 GTCAATGAAGGCACCTCGGTCGGCGGACAAGTCGATAATAGTCTTTTGCGAGAGCTCCCA 4827 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 4826 GACGGTCTTGTAGATGGCCTTGAGATC 4800 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| || |||||| || | Sbjct 4803 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGACTTGTCC 4862 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || |||| ||| |||||||| || ||||| || || | || || || Sbjct 4863 GCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTTAACATCCACTTGTCGAGCCCA 4922 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| |||| | || ||||| | ||||||||| | | || || ||||||||| Sbjct 4923 ACGATGGCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGAGAGGACTGAAGACGGGC 4982 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 4983 ATGTACTACTTGCGCACGCGGGCC 5006 >seq5 Length=201761 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 140104 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 140045 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 140044 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 140010 >seq3 Length=215525 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079 ||| ||||| ||| | || || ||||||||||| || ||||||||||| ||||| Sbjct 28341 CTCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTC 28282 Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 ||||||||||||||| || ||||| ||||| || || ||| Sbjct 28281 TTTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 28242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548489269306080