Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900008665.1_202016-07-08] 5,182 sequences; 26,789,479 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq428 185 1e-41 seq9 167 3e-36 seq75 165 9e-36 seq42 154 2e-32 seq158 150 2e-31 seq199 114 1e-20 seq463 109 6e-19 seq185 89.7 6e-13 >seq428 Length=13982 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| || || || ||||| ||||| Sbjct 13956 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 13897 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | |||||||| ||||||||||||||||| ||||||||||||||| Sbjct 13896 GATACGATCGACAATGTCAAGGCTAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 13837 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||| ||||| |||||||||| || || || || || || ||| Sbjct 13836 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 13777 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || | ||||| || ||||| Sbjct 13776 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 13730 Score = 167 bits (184), Expect = 3e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| || || || ||||| ||||| Sbjct 13728 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 13669 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || || ||||||||||| ||||||||||||||| Sbjct 13668 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 13609 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || |||||||| ||||| |||||||||| || || || || || || ||| Sbjct 13608 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 13549 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || || || | || | ||||| || || ||||| Sbjct 13548 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGGACA 13499 >seq9 Length=159304 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| || || || ||||| ||||| Sbjct 349 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 290 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || || ||||||||||| ||||||||||||||| Sbjct 289 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 230 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || |||||||| ||||| |||||||||| || || || || || || ||| Sbjct 229 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 170 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || | ||||| || ||||| Sbjct 169 ATCCAGAAGGAGTCGACGCTGCACTTGGTTCTCCGTCTCCGAGGTGG 123 Score = 102 bits (112), Expect = 9e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| ||||| || ||||| ||||| Sbjct 121 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATTACGCTCGAGGTCGAGTCCTCG 62 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || || ||||||||||| ||||||||||||||| Sbjct 61 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 2 Query 27526 C 27526 | Sbjct 1 C 1 >seq75 Length=81244 Score = 165 bits (182), Expect = 9e-36 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct 7511 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 7570 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || |||||||||||||| || ||||| ||||||||| Sbjct 7571 GACACGATCGACAACGTCAAGACCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAG 7630 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || ||||| |||||||||| ||||| || || || || || Sbjct 7631 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCGGATTACAAC 7690 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| || || || || | || ||||||| || ||||| ||| Sbjct 7691 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGGTCAA 7741 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct 7055 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 7114 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || ||||||||||| || ||||| ||||||||| Sbjct 7115 GACACGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 7174 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||| ||||| |||||||||| || || || || || || ||| Sbjct 7175 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 7234 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || ||||||| || ||||| Sbjct 7235 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGG 7281 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||||||||| || |||||||| || || || ||||| ||||| Sbjct 7283 ATGCAGATCTTTGTCAAGACGCTGACGGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 7342 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || ||||| |||||||| ||||| |||||||| Sbjct 7343 GACACGATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAA 7402 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || ||||| ||||| |||||||||| || || || || || || || Sbjct 7403 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAC 7462 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || ||||||| || ||||| Sbjct 7463 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGG 7509 >seq42 Length=107705 Score = 154 bits (170), Expect = 2e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467 |||||||||||||||||| ||||| |||||||| || || || ||||| ||||| || Sbjct 55166 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 55225 Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527 | || | || | ||| | || || || |||||||| || || || ||||||||||| Sbjct 55226 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 55285 Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587 ||||| || ||||| || ||||| |||||||||| || ||| | || ||||| || | Sbjct 55286 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 55345 Query 27588 CCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||| || || || || | ||| | || || || ||||| Sbjct 55346 CCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTCCGAGGTGG 55390 >seq158 Length=48607 Score = 150 bits (166), Expect = 2e-31 Identities = 169/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466 ||||||||||||||||||| || || |||||||| || || || ||||| ||||| | Sbjct 44540 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 44599 Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526 | | || | || | ||| | || || || |||||||| || || || |||||||||| Sbjct 44600 ACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 44659 Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586 | ||||| || ||||| || ||||| |||||||||| || ||| | || ||||| || Sbjct 44660 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 44719 Query 27587 TCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || || || || | ||| | || || || ||||| Sbjct 44720 TCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTGCGTGGTGG 44765 >seq199 Length=38555 Score = 114 bits (126), Expect = 1e-20 Identities = 221/321 (69%), Gaps = 9/321 (3%) Strand=Plus/Plus Query 24744 GAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGA 24803 ||| ||| |||||||| ||||| || || || ||||| || || || || || || Sbjct 12377 GAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAGACGACGCCCTTCTACCCTCGT 12436 Query 24804 AGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCC 24863 || || || ||| | ||| ||| ||| |||||||| |||||||||||| ||||| Sbjct 12437 TCGCCTTACGGAGTCGCCAAGTTGTACGCCTACTGGATCGTCAAGAACTACCGCGAGGCG 12496 Query 24864 CATGGGATATATGCATGCAACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCT 24923 | || || || || |||||||| || |||||||||| ||||| |||||| || | Sbjct 12497 TACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCACGAGTCCCCGCGTCGTGGTCGC 12556 Query 24924 GAATTTGTTACACGAAAGATTACTCTTGGTATTGACCA---TTGGATCAAGACA--AGGG 24978 ||||| || | |||||| | | | | | | | | | | || | || ||| Sbjct 12557 ACCTTTGTCACGAGGAAGATTTCCCGAGCTGTCGCCGAGATCTCGCTC-GGTCAACAGGA 12615 Query 24979 C-ACCTATTGAGCTGGGAAACCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTAC 25037 | ||| | | || || || | || ||||| ||||||||||| || || ||||||||| Sbjct 12616 CTGCCTCT--ACCTCGGCAATATGGAGGCCAAGCGTGATTGGGGACACGCCGCCGACTAC 12673 Query 25038 GTCGACGCCATGTGGCGCATG 25058 ||||| | |||||| | ||| Sbjct 12674 GTCGAGGGTATGTGGAGGATG 12694 >seq463 Length=11792 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 |||||||| |||| ||||||||||||||||| || || ||||||||||||| | |||| Sbjct 5005 GCCCGCGTGCGCAAGTAGTACATGCCCGTCTTCAGTCCTCTCTTCCAGCCGTAGAAGTGC 4946 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || || |||||| ||| | || ||| || || | |||||| || || || ||||| Sbjct 4945 ATCGACGTGAGCTGCGCCATCGTTGGGCTCGACAAGTGGATGTTAAGCGATTGCGACTGG 4886 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211 ||||| || || || || || | || || ||||| | |||||| | | ||||| Sbjct 4885 TCAATGAAGGCACCTCGGTCGGCGGACAAGTCGATAATAGTCTTTTGCGAGAGCTCCCAG 4826 Query 80212 ACTGT 80216 || || Sbjct 4825 ACGGT 4821 >seq185 Length=42020 Score = 89.7 bits (98), Expect = 6e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 24744 GAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGA 24803 ||| ||| |||||||| ||||| || ||||| ||||| || || || || || || Sbjct 36512 GAGTTGTACGGCAAGGTTGTCGAGACCCCTCAGTCCGAGACGACCCCCTTCTACCCTCGT 36453 Query 24804 AGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCC 24863 || || || ||| | ||| ||| ||| | |||||| |||||||||||| ||| | Sbjct 36452 TCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTCAAGAACTACCGCGAGTCG 36393 Query 24864 CATGGGATATATGCATGCAACGGAATTCTGTTCAACCATGAGTC 24907 | | || || || |||||||| || || |||||||| ||||| Sbjct 36392 TACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAGTC 36349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570273458143840