Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900009975.1_202016-07-08] 5,993 sequences; 26,287,464 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2 127 1e-24 >seq2 Length=213538 Score = 127 bits (140), Expect = 1e-24 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGCTCCGA 25795 || |||||| ||||| ||||| || || || | |||| | |||||||| |||| Sbjct 21390 CAACTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCC-TATACTCTGCGCCGA 21332 Query 25796 AATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGC 25855 ||| ||||||||||||||| || |||||||| | || || |||||||| || | || | Sbjct 21331 AATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGACCCAACC 21272 Query 25856 CCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGG 25915 | |||||||| ||| | ||| || ||||| | ||||| || || |||||||| |||| Sbjct 21271 CAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTCGG 21212 Query 25916 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 | | ||| || | || || |||| |||||||| ||||| ||| Sbjct 21211 ACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCC 21165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340112756455989