Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900009975.1_202016-07-08] 5,993 sequences; 26,287,464 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq107 104 2e-17 seq165 102 7e-17 seq71 87.8 2e-12 >seq107 Length=60113 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || ||||| || ||||||||| || | |||| | || ||| Sbjct 52688 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 52747 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || ||||| | |||||||| || || || ||||| | || || || || | Sbjct 52748 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 52807 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | | || | ||||| | | || || || || || || | ||| Sbjct 52808 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 52867 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGC 27245 ||||| ||||| || |||||||||||| Sbjct 52868 CCCGTAAGAGTCTTGACAAAGATTTGC 52894 >seq165 Length=45049 Score = 102 bits (112), Expect = 7e-17 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | || || || ||||| || ||||||||| | Sbjct 41203 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 41144 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || |||||||| || ||||| | |||||||| || || || ||||| Sbjct 41143 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 41084 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| | || | | | || | ||||| | | || || Sbjct 41083 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 41024 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCA 27246 || || || || | |||||||| || || || ||||||||||||| Sbjct 41023 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 40978 >seq71 Length=77428 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| || | ||| || || || || |||||||| ||| | |||| | Sbjct 69937 CGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA 69996 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || |||||||| || || ||| | || | ||||| || || || || | || || || Sbjct 69997 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTG 70056 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| | || | | | || | ||||| | || || || || || || || Sbjct 70057 TCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 70116 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||||||||| || || |||||||| |||||| Sbjct 70117 GTCTTGCCCGTCAGCGTCTTGACAAAGATCTGCATA 70152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424903362924216