Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 >seq4 Length=425142 Score = 86.0 bits (94), Expect = 5e-12 Identities = 190/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 18893 TGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAA 18952 ||| || || | ||||||| || ||||| || || | || | || ||||||| Sbjct 259737 TGTAATTGAAATGATTAAAAAAACACCAGACTCACGTCGTTTAATCGTTTCTGCTTGGAA 259796 Query 18953 TCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT 19012 |||| | ||| | || |||| |||| || ||||| ||| ||| |||||||| || Sbjct 259797 TCCAGAAGATGTACCAAGTATGGCCTTACCGCCTTGTCATACGCTATTCCAGTTTTATGT 259856 Query 19013 TGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGT 19072 ||| | || | | || || || |||| || ||| || || || |||||| | Sbjct 259857 AGCAGATGGAAAGCTTTCTTGTCAGTTATATCAAAGAAGTGGTGACATATTCCTTGGAAT 259916 Query 19073 ACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACT 19132 || || |||||||| | || |||| || || | || | || |||| ||||| Sbjct 259917 TCCATTTAACATTGCAAGTTACTCACTACTAACACATTTAATTGCACATGAATGCGGACT 259976 Query 19133 TAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTA 19177 | || ||||| || |||||||||| || |||||||| ||||| Sbjct 259977 TGAAGTGGGAGAATTTGTTCATACAATTGGTGATGCACACATTTA 260021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399477488540025