Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20lychnidis-
dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq14 111 1e-19
>seq14
Length=201404
Score = 111 bits (122), Expect = 1e-19
Identities = 230/338 (68%), Gaps = 6/338 (2%)
Strand=Plus/Plus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
|||||||||| || | ||||||||||| || || || || ||| | | | ||||
Sbjct 179928 TTCCAAGCACTCAAAATGATCCTTCTATCGGTGGGATTCTCCTTGATACTCTTGA-CAAC 179986
Query 101987 T-GTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCT 102043
| | | || || || || |||| || | |||||| || || | |||| |||
Sbjct 179987 TTGCATCAACTGATCGACCCCTTTCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCT 180044
Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103
|| ||||||||||||||||| || ||||| || ||||| ||||| || || || || | |
Sbjct 180045 GCGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGA 180104
Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCA 102163
|| |||| ||||| | ||| ||| ||||||||| |||||||||| | || ||
Sbjct 180105 CCCAACCCAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCC 180164
Query 102164 GCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACA 102223
| || | ||| || || ||||||| | ||||| | |||||| ||||
Sbjct 180165 TTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATG 180224
Query 102224 ACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261
| ||||| | ||| || |||| || || ||||| ||
Sbjct 180225 ATACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 180262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361227227031695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |