Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq14 111 1e-19 >seq14 Length=201404 Score = 111 bits (122), Expect = 1e-19 Identities = 230/338 (68%), Gaps = 6/338 (2%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||||||||| || || || || ||| | | | |||| Sbjct 179928 TTCCAAGCACTCAAAATGATCCTTCTATCGGTGGGATTCTCCTTGATACTCTTGA-CAAC 179986 Query 101987 T-GTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCT 102043 | | | || || || || |||| || | |||||| || || | |||| ||| Sbjct 179987 TTGCATCAACTGATCGACCCCTTTCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCT 180044 Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || ||||||||||||||||| || ||||| || ||||| ||||| || || || || | | Sbjct 180045 GCGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGA 180104 Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCA 102163 || |||| ||||| | ||| ||| ||||||||| |||||||||| | || || Sbjct 180105 CCCAACCCAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCC 180164 Query 102164 GCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACA 102223 | || | ||| || || ||||||| | ||||| | |||||| |||| Sbjct 180165 TTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATG 180224 Query 102224 ACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 | ||||| | ||| || |||| || || ||||| || Sbjct 180225 ATACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 180262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361227227031695