Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_001697.1 Length=32355 Score E Sequences producing significant alignments: (Bits) Value seq4101 82.4 2e-11 seq9 82.4 2e-11 seq1 82.4 2e-11 seq2763 80.6 6e-11 seq2489 80.6 6e-11 >seq4101 Length=257 Score = 82.4 bits (90), Expect = 2e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 ||||| | | ||||||| |||||||||||||| | ||||||||||| | ||||||||| Sbjct 182 TGGTGAGCCATGAAGGACTCGAACCTTCGACCCTCTGATTAAAAGTCAGATGCTCTACCA 241 Query 416 ACTGAGCTAA 425 |||||||||| Sbjct 242 ACTGAGCTAA 251 >seq9 Length=252781 Score = 82.4 bits (90), Expect = 2e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 ||||| | | ||||||| |||||||||||||| | ||||||||||| | ||||||||| Sbjct 29618 TGGTGAGCCATGAAGGACTCGAACCTTCGACCCTCTGATTAAAAGTCAGATGCTCTACCA 29559 Query 416 ACTGAGCTAA 425 |||||||||| Sbjct 29558 ACTGAGCTAA 29549 >seq1 Length=1156483 Score = 82.4 bits (90), Expect = 2e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 ||||| | | ||||||| |||||||||||||| | ||||||||||| | ||||||||| Sbjct 1155677 TGGTGAGCCATGAAGGACTCGAACCTTCGACCCTCTGATTAAAAGTCAGATGCTCTACCA 1155736 Query 416 ACTGAGCTAACGACCCAATTAGA 438 |||||||||| | | || || || Sbjct 1155737 ACTGAGCTAATGGCTCATTTTGA 1155759 >seq2763 Length=485 Score = 80.6 bits (88), Expect = 6e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 357 GGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGA 416 |||| | | ||||||| |||||||||||||| | ||||||||||| | ||||||||| | Sbjct 485 GGTGAGCCATGAAGGACTCGAACCTTCGACCCTCTGATTAAAAGTCAGATGCTCTACCAA 426 Query 417 CTGAGCTAA 425 ||||||||| Sbjct 425 CTGAGCTAA 417 >seq2489 Length=589 Score = 80.6 bits (88), Expect = 6e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 357 GGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGA 416 |||| | | ||||||| |||||||||||||| | ||||||||||| | ||||||||| | Sbjct 589 GGTGAGCCATGAAGGACTCGAACCTTCGACCCTCTGATTAAAAGTCAGATGCTCTACCAA 530 Query 417 CTGAGCTAA 425 ||||||||| Sbjct 529 CTGAGCTAA 521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103407713289530