Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_002486.1 Length=45636 Score E Sequences producing significant alignments: (Bits) Value seq9 114 4e-21 >seq9 Length=252781 Score = 114 bits (126), Expect = 4e-21 Identities = 180/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 8424 ACGCCGAATGGTGTGAGTGTTACCACTTTCACTATCGCAGTTAACAGAACATTTACTAAC 8483 ||||| |||||||| || | ||||| || | || || || | ||||| | || Sbjct 22263 ACGCCCAATGGTGTCGCAGTAGCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAAT 22322 Query 8484 GCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTTTTAGAAAACAAGCAGAA 8543 ||||| || ||||| || ||||||||||| ||||||| | | |||||||||||| Sbjct 22323 CAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAA 22382 Query 8544 AATGTAAATCATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCA 8603 || ||| ||||||| ||||| || || ||||| ||||||||| | ||| | Sbjct 22383 AACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACT 22442 Query 8604 CGCAGTTATGAAAACAAAGACGGGCAACGTGTGTTTGTTACAGAAGTAGTAGCGGACAGT 8663 || | ||| || |||| || ||||||| | || |||||||| | ||||| || Sbjct 22443 CGTAATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGC 22502 Query 8664 GTTCAATTCTTAGAACCG 8681 || ||||| ||||| ||| Sbjct 22503 GTGCAATTTTTAGAGCCG 22520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145904165317820