Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_002747.1 Length=37667 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 3e-15 >seq9 Length=252781 Score = 95.1 bits (104), Expect = 3e-15 Identities = 193/277 (70%), Gaps = 10/277 (4%) Strand=Plus/Plus Query 6189 GTAGGTCGCTTAACTCGTGACCCTGAACTTA-GATATACACCACAGAACCAAGCAGTAGG 6247 || ||||| |||||| |||||||| |||| | || || || | ||||||| Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGA-CTTACGTTACACGCCCAATGGTGTCGCAGTAGC 22285 Query 6248 CACATTTGGATTAGCTGTAAATCGTCAGTTTAAGAA-CGCCAATGGAGAGCGAGAAGCTG 6306 || ||| |||||||| ||||| ||| || | ||| || ||||| ||||||| Sbjct 22286 TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAA-GGTGAGCGTGAAGCTG 22344 Query 6307 ACTTCATTAATTGTGTTATTTGGCGACAACAAGCCGAAAATTTAGCCAA--ATTTGCTAA 6364 |||| ||||||||||| || ||||| ||||||| ||||| |||| || ||||| || Sbjct 22345 ACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTG--AA 22402 Query 6365 AAAAGG-CGCTTTGATTGGAATAACTGGACGAATTCAAACACGAAACTATGAGAACCAAC 6423 |||||| |||| | || || |||||| ||||||| || || || ||| ||| Sbjct 22403 AAAAGGTAGCTTAG-CAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAG 22461 Query 6424 AAGGACAAAAAGTTTATGTTACCGAAGTTGTTGCAGA 6460 | || || || || || || |||||| |||| || Sbjct 22462 ATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGA 22498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120405014183610