Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_003157.5 Length=43106 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 2e-12 >seq9 Length=252781 Score = 86.0 bits (94), Expect = 2e-12 Identities = 199/296 (67%), Gaps = 8/296 (3%) Strand=Plus/Plus Query 9664 TGATTAATAATGTAGTACTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAG 9723 |||| ||| ||| | || |||||||| | || |||||| | || | || || || Sbjct 22207 TGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGC 22266 Query 9724 CGAGTCAAGTAGCTGTAGCTACGTTCACACTTGCGGTAAACCGCAGATTT---AAAGAGC 9780 | | | || || |||||||| || || | || || || ||| |||| || ||| Sbjct 22267 CCAATGGTGTCGCAGTAGCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGC 22326 Query 9781 AAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCTGGCGACAGTCTGCTGAAA 9840 || || ||| | ||||| || || ||||| ||||| || ||||| | || |||| Sbjct 22327 AA---GGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAA 22383 Query 9841 ATTTAGCCAACTGGGCTAAAAAAGGT-GCTTTGATCGGAGTTACGGGTCGTATTCAGACA 9899 | |||| || | ||||||||| |||| | || || || ||| |||| || Sbjct 22384 ACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCA-GGCGTAGATGGACGTCTTCAAACT 22442 Query 9900 CGTAACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGA 9955 ||||| ||||| ||| | || ||||||| || |||||||||||| |||| || Sbjct 22443 CGTAATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGA 22498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137808688800120