Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_005258.1 Length=14935 Score E Sequences producing significant alignments: (Bits) Value seq7 141 9e-30 >seq7 Length=350003 Score = 141 bits (156), Expect = 9e-30 Identities = 306/450 (68%), Gaps = 21/450 (5%) Strand=Plus/Plus Query 14082 ACAATTAGATTTTACTATATTACGTGTGCAAGATGG----AAGTAGGGTTATAGATCGTG 14137 |||||| ||||| || ||||||||||||||| || || | |||||| | Sbjct 348787 ACAATTGGATTTCGTAATTGCACGTGTGCAAGATGGTTCAAACTATG----TAGATCCTT 348842 Query 14138 AGTATCAAAAGAATGTA-ACGGGATGTAAAGCCTATGGTGTA--CCATTCGGTAACTATG 14194 ||| |||| ||||| | | ||| ||||| | || || || || ||||| |||| Sbjct 348843 TATATAAAAATTATGTACAAGCAATG-AAAGC--ACGGAATATTCCGTTTGGTAATTATG 348899 Query 14195 CGTTTTGTCGTTTTGTATCTGAAAATGATGCTAGAGTGGAAGCGCGTGACTTCTGGGAAC 14254 |||| |||||||| || || | | | ||||| | | ||||| | ||||| ||| | | Sbjct 348900 CGTTCTGTCGTTTCGTTTCAGTAGAGGATGCACGGATAGAAGCAAGAGACTTTTGGAACC 348959 Query 14255 GTGGAGACAAGGATGCGACAATATGGTTTGCTGATATAGAAGTAACCACAATGGATGATA 14314 |||| || || |||| ||| | ||| | ||||| ||||||||| |||||| | |||| Sbjct 348960 GTGGTGATAAAAATGCAACAGTTTGGGTAGCTGACGTAGAAGTAAGAACAATGAACGATA 349019 Query 14315 TGAGAGCCGGAACACAAGCGTTCATAGACGAGTTGCGAAGACTAGGAGCGAAACGCGTCG 14374 ||||||| || ||||||| || || || || || || ||| ||||||| || | | Sbjct 349020 TGAGAGCGGGTGCACAAGCTTTTATTGATGAATTACGCAGATTAGGAGCTAAGAAGGCTG 349079 Query 14375 GAATCTATGTAGCACATCATAAATACAAGGAATTCCAAGCCGATAAAATCAATGCGGATG 14434 | | ||| | || ||||||| || ||| | | || ||||| | ||| Sbjct 349080 GTTTATATATTGCTCATCATATGTATGCTCCATTTGGAATGGCAAATTTCAATTCTGATT 349139 Query 14435 CTGTATGGATACCGCGCTA---TCCTAACAAACC--TCTATTCCCTTGTGACCTATGGCA 14489 ||||||||| || || || | ||||||||| |||| | ||||| | ||||| Sbjct 349140 TTGTATGGATTCCTCGTTACGGTGGTAACAAACCGGCGTATT--CATGTGATATTTGGCA 349197 Query 14490 ATACAGCGAAACGGGGCGTGTGGACGGTAT 14519 ||||| ||||| ||| ||||| ||||| Sbjct 349198 ATACACAGAAACAGGGAATGTGGCTGGTAT 349227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47670598574430