Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq12 125 1e-23 >seq12 Length=209919 Score = 125 bits (138), Expect = 1e-23 Identities = 210/304 (69%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 156761 TAATAGCAGCAGAAGGAATACCTGTAACTAAGGTTTCTGATTATACTGGATCACCAGAGA 156820 || ||| || | | || ||| |||| | | ||||||| ||||| | || || | Sbjct 198952 TACTAGAAGAAAACGGCTTACAAGTAATTGGGATTTCTGAAGTAACTGGTTTCCCTGAAA 198893 Query 156821 TTCTTAATGGAAGAGTGAAGACATTACATCCAAAGATTCATGGTGGTATTCTTGCACAGC 156880 || | |||| | ||||| |||||||||||||| |||||||||||| | | ||| | Sbjct 198892 TTATGGATGGCCGTGTGAAAACATTACATCCAAATATTCATGGTGGTCTATTAGCAGTTC 198833 Query 156881 GTGGTAATCCTGTACATGATATGGATCGTAATGCAAATGATATTGGATTGATTGATATTG 156940 ||| |||| ||||| | | | |||| | | ||| | ||||| ||| Sbjct 198832 GTGATAATGAAACACATGTAACGCAAATGAATGAATTAGGTATGGAGCCAATTGACTTTG 198773 Query 156941 TTGCAGTAAACTTATATCCTTTCGCAGAAACAGTTGCTAAACCAGATGTAACTCTTGCAG 157000 ||| || ||||||||||| || ||||||| | ||||| || |||||||| |||| | Sbjct 198772 TTGTTGTTAACTTATATCCATTTAAAGAAACAATCGCTAAGCCTGATGTAACATTTGCTG 198713 Query 157001 ATGCAATAGAGAATATTGATATTGGTGGTCCTAGTATGGTGAGATCAGCAGCAAAGAATT 157060 ||||||| || ||||||||||| ||||| || | ||| | | || || || || ||| Sbjct 198712 ATGCAATTGAAAATATTGATATCGGTGGCCCGACAATGATTCGCTCTGCTGCGAAAAATC 198653 Query 157061 ATAA 157064 |||| Sbjct 198652 ATAA 198649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807500235774200