Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 7e-12 >seq9 Length=252781 Score = 86.0 bits (94), Expect = 7e-12 Identities = 201/298 (67%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 || |||||||| |||||||| | || ||| | | ||||| ||||||| | ||| Sbjct 195384 CCGTGTGTTAAGTGACCACCATGAGATAAGTTCATACCAAGTACTGTATCGCCTTG-CTC 195326 Query 6986 AGCAA-CGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGC 7044 || || ||| || || ||| || |||| ||| || || |||||||| ||| | Sbjct 195325 TAAAATCGTGAAGTATACTGCCATGTTCGCTTGTGCACCAGAGTGTGGTTGAACATTTAC 195266 Query 7045 GAAAT-TGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGG 7103 | | ||| | ||| | |||||| | || ||| ||| | | || | | || Sbjct 195265 GTGCTCTGCGCCGAAA-ATTTCTTTCACGCGATCACGTGCGATATCTTCTACTACGTCTA 195207 Query 7104 CTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAA 7163 | | | |||| || || || || ||||| || |||||||| ||||||||||| || || | Sbjct 195206 CGTGTTCACAGCCACCATAGTAACGTTTTCCAGGATATCCTTCAGCATACTTATTCGTTA 195147 Query 7164 AAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCAA 7221 ||| ||||||||| || | ||| || | || || ||||||| || ||||| || Sbjct 195146 AAACAGAACCTTGTGCCTCCATTACTGCTTCACTTACGAAGTTTTCCGAAGCAATTAA 195089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553315937370600