Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_007049.1 Length=43883 Score E Sequences producing significant alignments: (Bits) Value seq9 123 7e-24 >seq9 Length=252781 Score = 123 bits (136), Expect = 7e-24 Identities = 182/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 34731 ACGCCAAATGGTGTGAGTGTTACCACTTTCACTATCGCAGTTAACAGAACATTTACTAAC 34790 ||||| |||||||| || | ||||| || | || || || | ||||| | || Sbjct 22263 ACGCCCAATGGTGTCGCAGTAGCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAAT 22322 Query 34791 GCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTTTTAGAAAACAAGCAGAA 34850 ||||| || ||||| || ||||||||||| ||||||| | | |||||||||||| Sbjct 22323 CAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAA 22382 Query 34851 AATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCA 34910 || ||| |||||||| ||||| || || ||||| ||||||||| | ||| | Sbjct 22383 AACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACT 22442 Query 34911 CGCAGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGT 34970 || | ||| || |||| || ||||||||| || |||||||| | ||||| || Sbjct 22443 CGTAATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGC 22502 Query 34971 GTTCAATTCTTAGAACCG 34988 || ||||| ||||| ||| Sbjct 22503 GTGCAATTTTTAGAGCCG 22520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140294928031050