Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_007055.1 Length=43681 Score E Sequences producing significant alignments: (Bits) Value seq9 136 1e-27 >seq9 Length=252781 Score = 136 bits (150), Expect = 1e-27 Identities = 208/294 (71%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 35105 GTAGGCCGTTTAACTAAGGATCCTGAAT-ACAGAACGACACCCTCAGGCGTAAGTGTAGC 35163 || || |||||||||||||| ||||| | || || || ||| || || ||||| Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGACTTACGTTAC-ACGCCCAATGGTGTCGCAGTAGC 22285 Query 35164 GACTTTTACTCTAGCGGTTAATCGTACGTTTACGAATGCGCAAGGGGAACGTGAAGCGGA 35223 |||||||| |||| || ||||| | ||| | ||| |||||| || |||||||| || Sbjct 22286 TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGA 22345 Query 35224 CTTTATTAACTGTGTTGTTTTTAGAAAACAAGCAGAAAACGTAAGCAATTACTTGTTTAA 35283 ||||||||| ||||| | | | |||||||||||||||||| ||||| ||| || Sbjct 22346 CTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAA 22405 Query 35284 AGGAAGTCTTGCAGGCGTTGATGGTCGCTTACAATCACGCAGTTACGAAAACCAAGAAGG 35343 ||| || | |||||||| ||||| || | ||| | || | |||||| ||||| || Sbjct 22406 AGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGATGG 22465 Query 35344 ACGCCGTATCTTTGTTACTGAAGTTGTATGTGACAGTGTGCAATTCCTAGAACC 35397 ||| | | || || |||||| | || || |||||||| |||| || Sbjct 22466 TAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCC 22519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139648569826870