Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_007064.1 Length=42431 Score E Sequences producing significant alignments: (Bits) Value seq9 138 3e-28 >seq9 Length=252781 Score = 138 bits (152), Expect = 3e-28 Identities = 203/285 (71%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 32912 TAACGAAAGACCCTGAATATAGA-ACAGCGCCAAATGGTGTGAGTGTGACCACTTTCACT 32970 |||| || |||||||| | | ||| |||| |||||||| || | ||||| || Sbjct 22237 TAACTAAGGACCCTGACTTACGTTACA-CGCCCAATGGTGTCGCAGTAGCTACTTTTACG 22295 Query 32971 ATCGCAGTTAACAGGACATTCACTAATGCTCAAGGAGAACGTGAGGCAGACTTTATTAAC 33030 | || || || | |||| | ||| ||||| || ||||| || ||||||||||| Sbjct 22296 TTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGACTTTATTAAT 22355 Query 33031 TGTGTAACTTTTAGAAAACAAGCAGAAAATGTAAAAAATTATTTATCCAAAGGGTCACTG 33090 ||||||| | | |||||||||||||| ||| ||||||||| ||||| | Sbjct 22356 TGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTA 22415 Query 33091 GCAGGTGTAGACGGACGATTACAAACACGTAACTACGAAAACAAAGACGGGCAACGTGTA 33150 ||||| ||||| ||||| | ||||| ||||| ||||| |||| || |||||||| Sbjct 22416 GCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGATGGTAAACGTGTA 22475 Query 33151 TATGTTACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCG 33195 || || |||||||| | ||||| || || ||||| ||||| ||| Sbjct 22476 TACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCG 22520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135648828464370