Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_007065.1 Length=43440 Score E Sequences producing significant alignments: (Bits) Value seq9 116 1e-21 >seq9 Length=252781 Score = 116 bits (128), Expect = 1e-21 Identities = 202/294 (69%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 35136 GTAGGACGATTAACAAAAGACCCAGAATTAAGAAGTACACCAAATGGCGTAAATGTAGGG 35195 || || || ||||| || ||||| || ||| | || || ||||| || |||| Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGCT 22286 Query 35196 ACATTCACATTAGCAGTAAACAGAACATTTACGAATGCTCAAGGCGAGCGTGAAGCAGAT 35255 || || || ||||| || || | ||||| | ||| ||||| ||||||||||| || Sbjct 22287 ACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGAC 22346 Query 35256 TTTATAAACGTAGTAGTGTTCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAA 35315 ||||| || ||| | | |||||||| |||||||| ||| || | ||| Sbjct 22347 TTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAA 22406 Query 35316 GGATCGTTGGCAGGTGTAGACGGACGACTACAAACACGCAGTTACGATAACAAAGAAGGG 35375 || || ||||| ||||| ||||| || ||||| || | |||||| |||| || Sbjct 22407 GGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGATGGT 22466 Query 35376 CGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCG 35429 |||||||| || |||||||| | ||||| ||||| ||||| ||||| ||| Sbjct 22467 AAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCG 22520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138877419692180