Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq472 219 1e-51 >seq472 Length=14052 Score = 219 bits (242), Expect = 1e-51 Identities = 576/869 (66%), Gaps = 10/869 (1%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||||||||| || ||| | |||||||| || | || ||||| | | || |||| Sbjct 10989 GAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAG 10930 Query 363508 GCCGCGA-TTGAAA-CATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCC 363563 |||| ||| | | || || ||| | || | | | || || || |||||| |||| Sbjct 10929 --CGCGTCTTGCAGTCGTACAACCTTAT--GTCCGAGCGCTACTTTACCCACGCCTCGCC 10874 Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAAT 363623 || | | ||| || ||||| | | | || ||| | || || || || || | | || Sbjct 10873 GACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGAT 10814 Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683 |||||| ||||| || || || || | ||||| ||||||| || || || || ||||| Sbjct 10813 GAAGGATGATTCGATTGAAGGCATTTACGACACGCTTAAGACGTGCGCGCTCATCTCCAA 10754 Query 363684 GAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTC 363742 || || || || || ||| | |||||||| | || || || | | ||||| Sbjct 10753 GACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG-CTCCTACATCG 10695 Query 363743 GCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 |||||| || |||||||| || | || |||||||| ||||| | |||| || | Sbjct 10694 CCGGCACGAACGGCTACTCGAACGGCATTGTCCCCATGCTCCGTGTCTACAACAACACCG 10635 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 || | ||||||||||| ||||| ||||| || || || || || || ||||||| Sbjct 10634 CGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGC 10575 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 | || ||||| | || || || || || || || || ||| || || |||||| Sbjct 10574 CGTGGCACGCCGACGTCTTCGAATTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAG 10515 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | || || |||||||| |||| ||| || ||| || | || | ||| ||| |||| || | Sbjct 10514 TTCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTTTTCATGGAGCGTGTCG 10455 Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 |||| | ||||| | ||||| ||||| |||| || || || ||| || | Sbjct 10454 AGGCCGCCGGCGATTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTACACGAAGTCT 10395 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 || || || | || | | ||| || || ||| |||||| || || | Sbjct 10394 ATGGCGAGGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAA 10335 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 | || ||||| || ||||| |||| || || | || | ||| | || || || | | Sbjct 10334 CGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACC 10275 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | |||| | |||||||| | ||| || || ||||| || | ||||| || | Sbjct 10274 CTTTTATGCTCTACAAAGACGCCGCGAACAAGAAATCGAACCAAAAGAATCTTGGCACGA 10215 Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 | || | ||||| || |||||||| || || ||| | || || |||||| |||| Sbjct 10214 TCAAGTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCG 10155 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCG 364311 | || ||| | || ||||||||| | ||| Sbjct 10154 TCTGCAACTTGGCCTCGATCGCGTTGCCG 10126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303262672757990