Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_007734.1 Length=40867 Score E Sequences producing significant alignments: (Bits) Value seq4 1272 0.0 seq3 273 6e-69 seq361 178 3e-40 seq19 174 4e-39 seq1 109 1e-19 >seq4 Length=425142 Score = 1272 bits (1410), Expect = 0.0 Identities = 820/902 (91%), Gaps = 5/902 (1%) Strand=Plus/Plus Query 35251 TAAATAAAATCTTTATTTGAAAATTAAAGATTGCTTTTGTTAGGGTCTCTATGACTAAGA 35310 || ||||||||||||||| ||||||||||| || |||| | |||| |||||||| ||||| Sbjct 175944 TAGATAAAATCTTTATTTAAAAATTAAAGAGTGGTTTT-TAAGGGGCTCTATGATTAAGA 176002 Query 35311 GTTATCTTAA-TTTTTTAGGTTTATGAAGTATTTGAGTAATAATTTAGTTTCAGACAAAG 35369 ||||| |||| ||||||| | || ||| |||||| || |||||||| |||| |||| || Sbjct 176003 GTTATTTTAAATTTTTTATGGTTTTGACGTATTTAAGCAATAATTTTGTTTAAGACTAAA 176062 Query 35370 GTGATGTTT-AGTAGTAATACCGGTTTGCTTCAGTAGACATTGCAATTGCTTTTGTTTCA 35428 | | | | | ||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct 176063 ATATTTTCTCATTAGTAATACCGATTTGCTTCAGTAGACATGGCAATCGCTTTTGTTTCA 176122 Query 35429 TGAACTGTACCATATGGATGTTCTGGAGGTGCATATATAGCGTAAATTTTAAGTGGTGTA 35488 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 176123 TGAACTGTACCATATGGATGTTCTGGGGGTGCATATATAGCGTAAATTTTAAGTGGTGTA 176182 Query 35489 TTTCCTGTATTGATTACATTATGCCATTTTCCAGCAGGTATCATAATTGCATAGTCATCA 35548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176183 TTTCCTGTATTGATTACATTATGCCATTTTCCAGCAGGTATCATAATTGCATAGTCATCA 176242 Query 35549 TAGACCATTTCTTGAAAATCTAATTTATCTTTGTTATCACCCATTTGAACGAGTCCTTGG 35608 || |||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 176243 TAAGCCATTTCTTGAAAATCTAATTTATCTTTGTTATCACCCATTTGAACAAGCCCTTGA 176302 Query 35609 CCCTCTTCAATACGTATGAATTGATCAGTTGTAGGGTGTACTTCTAAACCTATGTCATCT 35668 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176303 CCCTCTTCAATACGTATGAATTGATCAGTTGTAGGGTGTACTTCTAAACCTATGTCATCT 176362 Query 35669 CCAACATTAATACTCATTAAAGTTACTTGTAAGTTTTTTCCTGTCCAGATAGCGGTGCGG 35728 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176363 CCAACATTAATACTCATTAAAGTTACTTGTAAGTTTTTTCCTGTCCAGATAGCGGTGCGG 176422 Query 35729 TAAGTATTGTTTTGTTTAGTGGCTTGGTTAATATTCAATACAAATGGTCTAGCTCCATAA 35788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176423 TAAGTATTGTTTTGTTTAGTGGCTTGGTTAATATTCAATACAAATGGTCTAGCTCCATAA 176482 Query 35789 TCTGTTAATCTAACATTTTCACAATAAGGATTCCGGTTGCGGTTCCAAGCATTATTGTTG 35848 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 176483 TCTGTTAATCTAACATTTTCACAATAAGGATTCCGGTTGTGGTTCCAAGCATTATTGTTG 176542 Query 35849 TAATTGTAATAATAAGGATTCCAAGCGTAAATCCAATTATTGTTATTCCAGATGCTATCC 35908 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 176543 TAACTGTAATAATAAGGATTCCAAGCGTAAATCCAATTATTGTTATTCCAGGTGCTATCC 176602 Query 35909 ATTGGGCTTTGAGATTGATAATAATAACGTGGAATATGTTGCATATCCAAGCTCCTCTCA 35968 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176603 ATTGGGCTTTGAGATTGATAATAATAACGTGGAATATGTTGCATATCCAAGCTCCTCTCA 176662 Query 35969 TAATTGTATCATTTACTTTTTATCCTATGCTGTTGTCTATTTATAGGAATGCAGAATAAG 36028 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176663 TAATTTTATCATTTACTTTTTATCCTATGCTGTTGTCTATTTATAGGAATGCAGAATAAG 176722 Query 36029 GGGAAATGGGCAGTAAT-AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA 36087 |||||||||||||||| || ||| Sbjct 176723 AGGAAATGGGCAGTAATAAAAAATACAAACAAACGTTTGTATTTTTTCCAGGAAAAATAA 176782 Query 36088 AAGTAACAAGTTAATAAGGGATGTACTACTGGTAT-AAAAAACTTAATAAAATAGTTATT 36146 ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct 176783 AAGTAACAAGTTAATAAAGGATGTACGACTGGTATAAAAAAACTTAATAAAATAGTTATT 176842 Query 36147 TG 36148 || Sbjct 176843 TG 176844 Score = 1177 bits (1304), Expect = 0.0 Identities = 768/847 (91%), Gaps = 20/847 (2%) Strand=Plus/Plus Query 34450 GCTAGCACACTTTCCACAAAAGCTATTCTTTTTGGGGGTACTAATTCAGGGTTTCAACGT 34509 ||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct 174986 GCTAGCACATTTTCCACAAAAGCTGTTCTTTTTGGGGGTACTAATGCAGGATTTCAACGT 175045 Query 34510 ATAGCTGGATCACCGGGTGCAGATTCACAAGACATTCCTTATGTACTTGGCGGAGCTGGT 34569 || |||||||||| ||||||||||| ||| |||||||||||| ||| ||||||||| Sbjct 175046 GTATCTGGATCACCTGGTGCAGATTCTCAATTTATTCCTTATGTAACTGGAGGAGCTGGT 175105 Query 34570 AGTGTTGTAGGTCTTTCTGCTTCTATAAGTATTAATAATTTACCAATAGGAGTATATACA 34629 ||| |||||| | |||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 175106 AGTATTGTAGCTTTTTCTGCTTCAATAAGTATTAATAATTTACCCATAGGAGTATATACA 175165 Query 34630 ATACGAGTATGTAAAAATGTTCCTATTAATCTTGCTGCTCCGGGGCCTGGCCAAGTAATA 34689 || | ||||||||||||||||||| ||||||||||||| || |||||||||||||||||| Sbjct 175166 ATGCAAGTATGTAAAAATGTTCCTCTTAATCTTGCTGCACCAGGGCCTGGCCAAGTAATA 175225 Query 34690 TCTACAATTATTCTTACAACTACAGCAGTGATTAGTGGCACTATTATATTGACTATTAAT 34749 ||||| |||| | |||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 175226 TCTACTATTACTTTTACAACTACAGCAGTTATTAGTGGGACTATTATATTGACTATTAAT 175285 Query 34750 CCTTCTGATATTGGTGCACAACCTGTAAGAGTATTTAACCCTAATTTAGTTATAGCACCT 34809 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 175286 CCTTCTGATATTGGTGCACAACCTGTAAAAGTATTTAACCCTAATTTAGTTATAGCACCT 175345 Query 34810 GCTACAGTTGCTTGGAGCAGTACAATACCTGGTGACATAGTTGCAAGAGGTGATGCAATG 34869 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 175346 GCTACAGTTGCTTGGAGCAGTACAATACCTGGTAACATAGTTGCAAGAGGTGATGCAATA 175405 Query 34870 TCACTTTTTATAACTCCAGGTATTACGCAAAATGCTGTGTATACAGTATTCTTGCATACA 34929 |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| Sbjct 175406 TCACTTTTTATAACTCCAGGTATTACGCAAAATGCTGTATATACAGTATTCCTTGATACA 175465 Query 34930 GGAAATTAAAGTTTATTTTATGTGAATTTAAGTCCTGTAAATTGGAATGAAAAATTA--- 34986 | || |||||||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct 175466 GCAATTTAAAGTTTATTTTATGTGAATTTAAGTTCTTTAAACTGGAATGAAAAATTAAGT 175525 Query 34987 --------------AGATATGTATCGGAGTCTTTTTATGTACAAAAGAATAAGAGATTTC 35032 |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 175526 AACTTTAAAAAATGAGATATGTATAGGAGTCTTTTTATGTACAAAAGAATAAGAGATTTC 175585 Query 35033 TTCTGAACATCTAAAAGGAATCTCTTATTCTTAATCGATAAATTAGGTTTTAGAAAAATG 35092 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct 175586 TTCTGAACTTCTAAAAGGAATCTCTTATTCGTAATCGATAAATTAGGTTTTAGAAAAACG 175645 Query 35093 AAAAGATTTTGTATG-AAAATAAATAAAAGAATCCATTCGTTACAAACGGATTCTTCCCA 35151 |||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 175646 AAAAGATTGTGCATGAAAAATAAATAAAAGAATCCATTCGTTACAAACGGATTCTTCCTA 175705 Query 35152 CAAGGTGTGTAAGAAATTCAAGATAACTCGACCAGAGCATCATGTAGAATTTCTTGTGAT 35211 ||||||||| |||||||||||| ||||| |||||||||| ||| |||||||||||||||| Sbjct 175706 CAAGGTGTGCAAGAAATTCAAGGTAACTGGACCAGAGCACCATTTAGAATTTCTTGTGAT 175765 Query 35212 ATTAATGTATTCAAAGACATCCAAAAGATGAATGGCAATTAAATAAAATCTTTATTTGAA 35271 |||||||||||| |||| |||||||||||||||| |||| |||||||||||||||| | Sbjct 175766 ATTAATGTATTCCAAGAAATCCAAAAGATGAATGTGAATTGAATAAAATCTTTATTT--A 175823 Query 35272 AATTAAA 35278 ||| ||| Sbjct 175824 AATAAAA 175830 Score = 499 bits (552), Expect = 8e-137 Identities = 296/308 (96%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 33285 TAATACAATTTGAATTTTGTTAAGAAAAAGTGAGTGAGAGATGGAACTATTATGAACTAT 33344 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 173810 TAATCAAATTTGAATTTTGTTAAGAAAAAGTGAGTGAGAGATGGAACTATTATGAACTAT 173869 Query 33345 AGAATTCCAATATTGGGAATCTATATTAATTATATAATTTAAAAATGTGGTAATGGTTAA 33404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 173870 AGAATTCCAATATTGGGAATCTATATTAATTATATAATTTAAAAATGTGGTAATGGTTAA 173929 Query 33405 GATTTTAATATAGGGAATTTATGAAGTGTTAGTATGATTTGATTGGCTGTCTTTAACTTT 33464 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 173930 GATTTTAATATAAGGAATTTATGAAGTGTTAGTATGATTTGATTGGCTGTTTTTAACTTT 173989 Query 33465 TTATTAGTAATTTCATATATTGTAGGGTGCAATATTGAAGAAGTATgggggg--gAGAAA 33522 ||||||||||||||||||||||||||||||||||||||||| |||| || | || ||| Sbjct 173990 TTATTAGTAATTTCATATATTGTAGGGTGCAATATTGAAGATTTATGAGGAGTTGAAAAA 174049 Query 33523 ATGGATTGTTTTAAAAAAGGTAAATTTATACCATTTCCATGTGCTTTACCAATTCCTGAA 33582 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 174050 ATGGATTGCTTTAAAAAAGGTAAATTTATACCATTTCCATGTGCTTTACCAATTCCTGAA 174109 Query 33583 GCTGGTCC 33590 |||||||| Sbjct 174110 GCTGGTCC 174117 Score = 226 bits (250), Expect = 7e-55 Identities = 185/223 (83%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 35101 TTGTATGAAAATAAATAAAAGAATCCATTCGTTACAAACGGATTCTTCCCACAAGGTGTG 35160 |||||||| | ||||||||||| || || |||| ||||||||||||| | |||||| || Sbjct 177962 TTGTATGACCAAAAATAAAAGAACCCGTTTGTTATAAACGGATTCTTCTCTCAAGGTCTG 178021 Query 35161 TAAGAAATTCAAGATAACTCGACCAGAGCATCATGTAGAATTTCTTGTGATATTAATGTA 35220 |||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||| Sbjct 178022 CAAGAAATTCAAGGTAACTGGACCAGAGCCCCATATAGAATTTCTTGTGATATTAATGTA 178081 Query 35221 TTCAAAGACATCCAAAAGATGAATGGCAATTAAATAAAATCTTTATTTGAA---AATTAA 35277 |||||||| ||| ||||||||||||| |||||||||||||| ||||||||| || || Sbjct 178082 TTCAAAGAAATCTAAAAGATGAATGGGAATTAAATAAAATCCTTATTTGAACAGAAAAAA 178141 Query 35278 AGATTGCTTTTGTTAGGGTCTCTATGACTAAGAGTTATCTTAA 35320 ||| || | | || | |||| |||| |||| |||| |||| Sbjct 178142 AGAGCGCATGGGAAAGTG-CTCTTTGACCAAGATTTATATTAA 178183 Score = 156 bits (172), Expect = 1e-33 Identities = 130/155 (84%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 36697 AAACAGCTAGCGTGATTA-GCTAGCTGTCCTGTTAAGAAAAGAAAACGGTGTTTAGCAAA 36755 ||||||||||| | || | ||||||||||||| ||| |||||||||||||| ||| |||| Sbjct 179434 AAACAGCTAGC-TAATCACGCTAGCTGTCCTGGTAAAAAAAGAAAACGGTGCTTAACAAA 179492 Query 36756 TGTTGCTGTTGTAATTGCGAATTACAACCATAGTATGAGCAGAAGTAAAAATGTTATGCA 36815 | |||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||| Sbjct 179493 TATTGCTGTTGTAATTGCGAATTACAACTATAGTATGAACAGGGTTGAAAATGTTATGCA 179552 Query 36816 AGAA-AGTTAAATAAAAACTGCATTTTATTGAAAA 36849 | || | | ||| |||| | |||||| | ||||| Sbjct 179553 AAAATAATCTAATGAAAATTTCATTTTGTGGAAAA 179587 Score = 123 bits (136), Expect = 7e-24 Identities = 115/145 (79%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 36214 AAAGAATATTGTATACCAAATTGATAGTAATGCAAGCCATCCAATTGTCAGCGCTATGTA 36273 ||||||||| | |||||||| |||| ||||| | ||||||||| || || || |||| Sbjct 177820 AAAGAATATAGCATACCAAAAAGATATTAATGTGATCCATCCAATAGTAAGAGCGGTGTA 177879 Query 36274 TTTTAAAATTTTCATGATTACTCCTTTTAGGTATAGAGTGCACCAAGCAAGAGGATGTTA 36333 |||||| |||||||||||| |||||||| |||||||||||||| | ||| || | Sbjct 177880 TTTTAAGGTTTTCATGATTAGTCCTTTTA-TTATAGAGTGCACCAGGATGGAGAATTCAA 177938 Query 36334 TTAATTTTTAAACAAAATGCTTATT 36358 ||||||||| |||||| | | |||| Sbjct 177939 TTAATTTTTTAACAAACTTCGTATT 177963 >seq3 Length=500241 Score = 273 bits (302), Expect = 6e-69 Identities = 357/489 (73%), Gaps = 4/489 (1%) Strand=Plus/Plus Query 17764 AAAAAAGGAGATGTTCAGTAATGGAAATCCaaaaaaaaTTAGTTGATCCAAGTAAGTATG 17823 |||||||||||| |||||||||||||| |||||||||||| ||||||||||| |||| Sbjct 206 AAAAAAGGAGATAATCAGTAATGGAAATTAGAAAAAAATTAGTGGATCCAAGTAAATATG 265 Query 17824 GTACAAAGTGTCCGTATACAATGAAGCCTAAATATATCACTGTTCACAACACATATAATG 17883 ||| ||||||||| ||||||||| || ||| ||||| || || || || || |||| Sbjct 266 GTATAAAGTGTCCCAATACAATGACACCAGAATTCATCACAGTACATAATACGTACAATG 325 Query 17884 ATGCTCCAGCTGAAAATGAAGTGAGTTACATGATTAGTAACAATAATGAGGTGTCGTTTC 17943 |||| |||| |||||||| | || |||||| | || |||||| |||||||||| Sbjct 326 ATGCATCAGCAGAAAATGAGATATCGTATATGATTGGGAATAATAATTCAGTGTCGTTTC 385 Query 17944 ATATTGCAGTAGATGACAAGAAAGCGATTCAAGGTATTCCGTTGGAACGTAATGCATGGG 18003 || |||||||||||||||| |||| | |||||||||| ||| || |||||||| | || Sbjct 386 ATGTTGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTGATCGTAATGC-TTGG 444 Query 18004 CTTGC-GGAGACGGCAATGGTTCGGGGAATCGTCAATCCATTTCTGTAGAAATCTGTTAT 18062 | ||| || || || || || || |||||| |||| || || ||||| || ||| Sbjct 445 CATGCAGGTGATGGTAACGGAAATGGTAATCGTAAATCTATCGGAGTGGAAATTTGCTAT 504 Query 18063 TCAAAATCAGGAGGAGATAGATACTATAAAGCTGAGGATAATGCTGTTGATGTTGTACGA 18122 || | || || |||||||| || || || ||||||||||| | |||| | Sbjct 505 TCTCTAAGCGGTGGGGATAGATATTACAAGGCGGAGGATAATGCAGCAATTGTTATTGCT 564 Query 18123 CAACTTATGTCTATGTACAATATTCCGATTGAAAATGTTCGAACTCATCAATCCTGGTCA 18182 || | ||| | |||||| |||||| ||||| || || ||| |||| ||| Sbjct 565 CAGTTAATGAAACAATTCAATATACCGATTAGTAATGTACGTACACATAAATCGTGGAGT 624 Query 18183 GGTAAATATTGTCCGCATAGAATGTTAGCTGAGGGAAGGTGGGGAGC-ATTCATTCAGAA 18241 || || |||| || ||| ||||| | | ||| |||| | | ||| | ||||||| |||| Sbjct 625 GGAAAGCATTGCCCACATCGAATGCTCGATGAAGGAA-GAGTGGATCAATTCATTGAGAA 683 Query 18242 GGTTAAGAA 18250 | | || || Sbjct 684 GATAAACAA 692 >seq361 Length=20807 Score = 178 bits (196), Expect = 3e-40 Identities = 181/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 37824 AAGTAGGTGAATCATCATTTGTTTAACTGGCTGAGAGATTACCAAAAGTTAGAAGAAGAC 37883 |||| ||||||||| | |||| | ||||| | |||||| | |||||||||||||| Sbjct 18014 AAGTGGGTGAATCAGTAAGTGTTCGAATGGCTCAAAGATTATAAGAAGTTAGAAGAAGAA 18073 Query 37884 ATAGCCTATCTGGAATACAACTTAGATAAGACAAAAGCTGAATTAAGACGCTGGGTGAGT 37943 || || ||| | ||||||||||||||||| ||||||| ||||| | || ||| | || Sbjct 18074 ATTGCTTATTTAGAATACAACTTAGATAAATCAAAAGCCGAATTGAAGCGTTGGATTAGC 18133 Query 37944 GGTGATTTGAGAGAAGTACGTTTAACGGCAGAATCTGAAGGTGCAAAAGTTGAAAACCGC 38003 ||||||||| | | ||| | ||||| || ||||| ||||| || || || ||| || Sbjct 18134 GGTGATTTGCAAAATGTAAGATTAACCGCTGAATCGGAAGGGGCTAAGGTAGAAGGGCGG 18193 Query 38004 ATTGAAGCGATTGAATACGAATTAGCACATAAGATGAACGATATGTATAAATTAAA 38059 |||||||| |||||||| |||||||| ||||| ||||| || |||| | ||||| Sbjct 18194 ATTGAAGCAATTGAATATGAATTAGCTCATAAAATGAATGAAGAGTATGATTTAAA 18249 Score = 154 bits (170), Expect = 4e-33 Identities = 263/379 (69%), Gaps = 7/379 (2%) Strand=Plus/Plus Query 28106 GATCCAATGAGTATTTTAAAACTTACATTCGAAGCATTAGAAGGCCAGCAGCAAGCAATC 28165 ||||||||| | ||||||| | ||||| | || |||||||| || || | || Sbjct 16290 GATCCAATGGGGGTTTTAAAGTTAACATTTGCTGCGTTAGAAGGACATACTCAGGAGATA 16349 Query 28166 GAAGAGATAAAGTCGGATGTACAAGACTTGAGAGAAAATACACCATTATTTGCAATTGAA 28225 ||||||||||||| || || | | ||| |||||||||| || | | ||| || || Sbjct 16350 CAAGAGATAAAGTCTGAGGTGAAGGGTTTGCGAGAAAATACGCCGCTTTATGCTATCGAG 16409 Query 28226 TGTGATGAAATCTCTACAGCTGTAAAACGTCAAGGAGTCATATTGTTAGGTGGAAAACAG 28285 ||||| || || | | ||||||||| | ||| || || || || || || ||| | Sbjct 16410 TGTGAAGAGATAACAAGGGCTGTAAAAAGGTTAGGTGTTATGTTATTGGGAGGTAAAAAT 16469 Query 28286 TCTAATGCCTATC--GAAATCGTGGATTAAGAGGGAAAGTTTATCGTGATATCTACAACC 28343 || ||| | |||| || ||| || | ||| |||| | ||| | ||||| || | | Sbjct 16470 TCAAATTCTTATCAGGATATC--GGTCTTAGAAGGAAGTTATATAGAGATATTTATAGTC 16527 Query 28344 AACTATACCGTGAATTCGGAGTGAAAAGTCACAAAGCAATTAAACGTTGTCACTTAAATG 28403 | || | || ||||| || ||||| ||| | ||||| |||||||||| ||| || || Sbjct 16528 AGTTACATCGGGAATTTGGTGTGAATAGTTATAAAGCTATTAAACGTTATCATTTGGATA 16587 Query 28404 TAGCAGTAAAAATAGT---TGAAGAATATACACTTCCAATTGTATTGAGCGAAGAGATTT 28460 |||| || |||| | |||||||||| || |||||| ||| || | ||||| ||| Sbjct 16588 GAGCAATACAAATGATTAATGAAGAATATTCAATTCCAACTGTTTTAAATGAAGAAATTA 16647 Query 28461 CTTTTGTAAATGCACAAAT 28479 | || ||| ||||||| Sbjct 16648 CAGTTAAAAACTCACAAAT 16666 >seq19 Length=184000 Score = 174 bits (192), Expect = 4e-39 Identities = 386/564 (68%), Gaps = 14/564 (2%) Strand=Plus/Minus Query 20430 TTAGAAAAACTTATCTATCATGATTTTGATAAAACACCACATATGACACTAGGTGGTCTG 20489 ||||| |||| | | |||||||||||||| ||||| || |||||| | ||| || Sbjct 64240 TTAGATAAACATGTGTATCATGATTTTGAGAAAACGCCGCATATGTGCGTGTCGGGTATG 64181 Query 20490 ACACGGATGGGAAAAACGGTATTTTTAAAAAATGTAGTTACTTCTCTTACTTTAGCA-CA 20548 |||||| | |||||||| |||||||||||||||||| | ||| | ||| ||| ||| || Sbjct 64180 ACACGGTTTGGAAAAACCGTATTTTTAAAAAATGTAATGACTAGT-TTAATTTTGCAACA 64122 Query 20549 ACCAGAACATATTAATTTATACATTATTGATTTAAAAGGGGGCTTGGAGTTTGGGCCGTA 20608 | | |||| | || || | |||||||||||||| | || | |||||| | || || Sbjct 64121 ATCCCAACACGTGAAATTTTTTATTATTGATTTAAAGGAAGGGCTAGAGTTTAGTCCTTA 64062 Query 20609 TAAGAATTTAAAACAGGTAGTTTCTATTGCTGAAAAGCCCGCAGAAGCTTTTATGATAT- 20667 || | ||| || || || | |||||||| |||| | || ||| || || Sbjct 64061 CAAAGAGTTATCCCAAGTTGTAGAAGTCGCTGAAAA-CCCGAAACAGGCATTA-GAAATG 64004 Query 20668 TAACTAATA-TCCTCAAGAAGATGGAAGAGAAAATGGAATATATGAAATGTAGAC--ATT 20724 | || | | | | ||||||| | | | || ||| ||||| | || | ||| Sbjct 64003 TTGGGAAGAGTACGTGAAAAGATGGTAAAACAGATTGAAATGATGAA--GAAGTCCTATT 63946 Query 20725 ATACGAATGTTGTAGAAACAAATATCAAAGAGCGTTACTTCATAATAGTAGACGAAGGAG 20784 ||| ||| | |||| ||| || | ||| |||| |||||| |||||||| ||||||| Sbjct 63945 TTACCAATATCATAGACACATCGATTAGAGAACGTTGCTTCATCATAGTAGATGAAGGAG 63886 Query 20785 CCGAACTTTGCCCAGATAAAAGTATGA-AAAAAGAACAGC-AAAGGTTATTAGGAGCGTG 20842 | | ||||| ||| | | ||| || | ||| |||| | | ||| ||| ||| Sbjct 63885 CAAATCTTTGTCCA-ACACAAGGATTACCTAAAAAACAACGTGATGTT-TTATTTTTGTG 63828 Query 20843 TCAACAAATGCTCTCTCATATAGCGCGCATAGGTGGTGCTTTAGGTTTTAGATTGATTTT 20902 || | ||| | || | | || | || || |||| |||||| || | | || || Sbjct 63827 CCAGGAGATGTTGTCCGAAGTCGCAAGAATCGGAGGTGGTTTAGGATTCCGGCTCATATT 63768 Query 20903 TTGTACACAGTACCCGACAGGGGATACATTACCGCGCCAAGTAAAACAAAATAGTGATGC 20962 |||||| || || || || ||||||||||| | ||| | ||||||||| |||||| Sbjct 63767 TTGTACGCAATATCCAACCTCTGATACATTACCAAGGCAAATTAAACAAAATGCTGATGC 63708 Query 20963 GAAATTAGGCTTTAGATTACCGAC 20986 |||| |||||||| ||||||| || Sbjct 63707 GAAAATAGGCTTTCGATTACCAAC 63684 Score = 107 bits (118), Expect = 5e-19 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 36458 AAACAAAATCGTTATTTTATAGATCGGAGTGAAATTCAAATGATTGTTAAAGCGACAATA 36517 |||||||||| ||||||||| |||||||||||||| ||||||||||||||| || ||| Sbjct 87260 AAACAAAATCTTTATTTTATGGATCGGAGTGAAATCACAATGATTGTTAAAGCAACGATA 87319 Query 36518 AAACTTGAATTAGATGATT 36536 ||||||||||||| ||||| Sbjct 87320 AAACTTGAATTAGCTGATT 87338 Score = 95.1 bits (104), Expect = 3e-15 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 36620 AAAATTGAATTAGCTGATTTTGTGGAGATGAAATACAAAAATAAGTAATTTAAACCAAAA 36679 ||| ||||||||||||||||||| |||||| |||||||| | ||||||||||||||||| Sbjct 87320 AAACTTGAATTAGCTGATTTTGTAGAGATGGAATACAAAGACAAGTAATTTAAACCAAAT 87379 Query 36680 CGCTATTTTATA 36691 || |||||| || Sbjct 87380 CGTTATTTTGTA 87391 >seq1 Length=1156483 Score = 109 bits (120), Expect = 1e-19 Identities = 188/273 (69%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 23279 TACGCTGTTTATGTACGAGTTTCAACGGATAGAGATGAGCAAGTTTCATCTGTTGAAAAT 23338 ||||| || ||||| || || ||||| || ||||||| |||||||||||||| ||||| Sbjct 770370 TACGCAGTATATGTTCGTGTGTCAACTGACCGAGATGAACAAGTTTCATCTGTCGAAAAC 770311 Query 23339 CAGATTGATATTTGTCGATATTGGTTAGaaaaaaaCGGATATGAGTGGGATCCAAATGCA 23398 || || ||||| || || | ||||||||| ||| |||| | |||||| || Sbjct 770310 CAAATAGATATCTGCCGGAACTGGTTAGAACGAAATGGATTCAATTGGGATGAGAAACGT 770251 Query 23399 GTATATTTTGACGATGGTATTTCTGGTACAGCTTGGTTAGAACGTCATGCGATGCAACTA 23458 || | | || || || | ||| || | |||| | | | || ||| || Sbjct 770250 GTTTTTAAAGATGAAGGGGTAAGTGGAACTTTATTTGTAGACAGACCATCTATTCAATTA 770191 Query 23459 ATATTAGAAAAAGCAAGACGAAATGAATTGGATACAGTCGTATTTAAATCTATACACCGT 23518 | ||| |||| |||| | ||| ||| | ||| || || ||||||||||| |||| Sbjct 770190 CTGTTAAAAAAGGCAAAAGCAAAAGAAATTAATATGGTTGTTTTTAAATCTATTTCCCGT 770131 Query 23519 TTAGCAAGGGATCTAAGGGATGCCTTAGAAATT 23551 ||||| |||||| | | |||| | ||||||||| Sbjct 770130 TTAGCGAGGGATTTGAAGGATTCGTTAGAAATT 770098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130644352071610