Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_009811.2 Length=137619 Score E Sequences producing significant alignments: (Bits) Value seq2489 93.3 4e-14 seq69 93.3 4e-14 seq16 91.5 1e-13 >seq2489 Length=589 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 29596 GCTGGTCTAGTTGGATTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 29655 ||||| |||| ||||||||||||| || || ||||| ||||| ||||||||||||||||| Sbjct 508 GCTGGGCTAGCTGGATTCGAACCAGCGCATGACGGAGTCAAAGTCCGTTGCCTTACCGCT 449 Query 29656 TGGCTACAGACCAATA 29671 |||||| || ||| || Sbjct 448 TGGCTATAGCCCATTA 433 >seq69 Length=88854 Score = 93.3 bits (102), Expect = 4e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 29596 GCTGGTCTAGTTGGATTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 29655 ||||| |||| ||||||||||||| || || ||||| ||||| ||||||||||||||||| Sbjct 88029 GCTGGGCTAGCTGGATTCGAACCAGCGCATGACGGAGTCAAAGTCCGTTGCCTTACCGCT 88088 Query 29656 TGGCTACAGACCAATAGTA 29674 |||||| || ||| || || Sbjct 88089 TGGCTATAGCCCATTAATA 88107 Score = 91.5 bits (100), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 29596 GCTGGTCTAGTTGGATTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 29655 ||||| |||| ||||||||||||| || || ||||| ||||| ||||||||||||||||| Sbjct 615 GCTGGGCTAGCTGGATTCGAACCAGCGCATGACGGAGTCAAAGTCCGTTGCCTTACCGCT 674 Query 29656 TGGCTACAGACCA 29668 |||||| || ||| Sbjct 675 TGGCTATAGCCCA 687 >seq16 Length=199848 Score = 91.5 bits (100), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 29596 GCTGGTCTAGTTGGATTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 29655 ||||| |||| ||||||||||||| || || ||||| ||||| ||||||||||||||||| Sbjct 1379 GCTGGGCTAGCTGGATTCGAACCAGCGCATGACGGAGTCAAAGTCCGTTGCCTTACCGCT 1320 Query 29656 TGGCTACAGACCA 29668 |||||| || ||| Sbjct 1319 TGGCTATAGCCCA 1307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440222835293800