Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_009815.1 Length=38124 Score E Sequences producing significant alignments: (Bits) Value seq9 230 6e-56 >seq9 Length=252781 Score = 230 bits (254), Expect = 6e-56 Identities = 241/317 (76%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 34915 CGAATGATGAATCGTGTAGTACTTGTAGGACGATTAACTAAAGACCCTGATTTACGTTAC 34974 ||| ||||||||||||| | || || || || |||||||| |||||||| ||||||||| Sbjct 22203 CGATTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTAC 22262 Query 34975 ACTCCAGCCGGCGCGGCTGTTGCGACTTTTACGCTAGCAGTAAATCGTATGTTCACTAAT 35034 || || || | || || || ||||||||| |||| || ||||| || | ||| Sbjct 22263 ACGCCCAATGGTGTCGCAGTAGCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAAT 22322 Query 35035 CAAAACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGCAAACCAGCAGAA 35094 || | || || || ||||| || || ||||||||||| | ||||| |||| ||||||| Sbjct 22323 CAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAA 22382 Query 35095 AACGTTGCTAATTTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGACGTGTTCAAACT 35154 ||||| || |||| ||||| ||||| ||| | || ||||| ||||||||| |||||||| Sbjct 22383 AACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACT 22442 Query 35155 CGTAATTATGAGGATAACGACGGTAAACGTGTTTTCGTTACTGAGGTAGTTGCTGAATCA 35214 |||||||| |||| | || ||||||||||| | ||| || || || |||| ||| Sbjct 22443 CGTAATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGC 22502 Query 35215 GTTCAATTCTTAGAACC 35231 || ||||| ||||| || Sbjct 22503 GTGCAATTTTTAGAGCC 22519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121867319625740