Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_010808.1 Length=44342 Score E Sequences producing significant alignments: (Bits) Value seq9 105 2e-18 >seq9 Length=252781 Score = 105 bits (116), Expect = 2e-18 Identities = 202/295 (68%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 7391 GTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGGT 7450 || || || ||||| || ||||| || ||| | | |||| ||||| || |||| | Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGCT 22286 Query 7451 ACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGAT 7510 || || || || || || || | |||| | ||| ||||| ||||||||||| || Sbjct 22287 ACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGAC 22346 Query 7511 TTTATAAACGTAGTAGTGTTCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAA 7570 ||||| || ||| | | |||||||| ||||| || ||| || || ||| Sbjct 22347 TTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTA-TTTGAAAAA 22405 Query 7571 GGGTCGC-TGGCAGGTGTAGACGGGCGACTACAAACACGTAGCTACGAAAATAAAGTCGG 7629 ||| || | ||||| ||||| || || || ||||| |||| ||||| ||| || Sbjct 22406 AGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGATGG 22465 Query 7630 GCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCG 7684 ||||||||| || |||||||| | ||||| || || ||||| ||||| ||| Sbjct 22466 TAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCG 22520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141763633059360