Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_011614.1 Length=42526 Score E Sequences producing significant alignments: (Bits) Value seq9 123 7e-24 >seq9 Length=252781 Score = 123 bits (136), Expect = 7e-24 Identities = 206/295 (70%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 7091 GTAGGGCGATTAACAAAAGACCCAGAATTAAGAAGCACGCCAAATGGCGTAAATGTAGGG 7150 || || || ||||| || ||||| || ||| | |||||| ||||| || |||| Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGCT 22286 Query 7151 ACATTCACATTAGCAGTAAACAGAACATTTACGAATGCTCAAGGCGAGCGTGAAGCAGAT 7210 || || || ||||| || || | ||||| | ||| ||||| ||||||||||| || Sbjct 22287 ACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGAC 22346 Query 7211 TTTATAAACGTAGTAGTGTTCAAAAAACAAGCCGAAAATGTTAAAAACTACCTTTCTAAA 7270 ||||| || ||| | | |||||||| ||||| || ||| || || ||| Sbjct 22347 TTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTA-TTTGAAAAA 22405 Query 7271 GGGTCGC-TGGCAGGTGTAGACGGGCGACTACAAACACGTAACTACGAAAATAAAGACGG 7329 ||| || | ||||| ||||| || || || ||||| ||||| ||||| |||| || Sbjct 22406 AGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGATGG 22465 Query 7330 ACAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCG 7384 ||||||||| || |||||||| | ||||| || || ||||| ||||| ||| Sbjct 22466 TAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCG 22520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135952808807920