Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_011645.1 Length=37456 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 8e-16 >seq3 Length=500241 Score = 96.9 bits (106), Expect = 8e-16 Identities = 267/404 (66%), Gaps = 19/404 (5%) Strand=Plus/Plus Query 19532 TAAATATGAATTATTGTGTCCTAATCCTATGACACCAACTGAA---ATTACTCTCCATAA 19588 |||||||| || |||||| ||| | ||||||||| ||| || || | ||||| Sbjct 258 TAAATATGGTATAAAGTGTCCCAATACAATGACACCA---GAATTCATCACAGTACATAA 314 Query 19589 TACTTATAATGATGCACCAGCCATAAACGAACGTAATAACGTAGCTAATAACTCACAAGG 19648 ||| || ||||||||| |||| ||| || ||| |||| | || | || Sbjct 315 TACGTACAATGATGCATCAGCAGAAAATGAG----ATATCGTATATGATTGGGAATAATA 370 Query 19649 AACAAGT----TTTCACGTCGTTGTAGATGATAAAGAAGCGATCCAATTAATTCCATTCA 19704 | ||| ||||| || | |||||||| |||||||| | ||| |||| || Sbjct 371 ATTCAGTGTCGTTTCATGTTGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTG 430 Query 19705 ATCGCAATGCCTGGCACGCTGGAGACGGAGGAAGCGGACGCGGTAACCGTCATTCTATCG 19764 |||| ||||| ||||| || || || || | |||| ||||| ||| | ||||||| Sbjct 431 ATCGTAATGCTTGGCATGCAGGTGATGGT---AACGGAAATGGTAATCGTAAATCTATCG 487 Query 19765 GAGTTGAAATCTGTTATTCTAAATCTGGTGGCCCGCGTTATGAACAAGCTGTACGA-AAT 19823 |||| ||||| || |||||| | ||||| | ||| ||||| | | || ||| Sbjct 488 GAGTGGAAATTTGCTATTCTCTAAGCGGTGGGGATAGATAT-TACAAGGCGGAGGATAAT 546 Query 19824 GCGATCATCGTTATTAGACAGTTAATGGATCAGTTTAACATCCCGATTGATCGTGTTAAA 19883 || || |||||| ||||||||| | || || || || |||||| | ||| Sbjct 547 GCAGCAATTGTTATTGCTCAGTTAATGAAACAATTCAATATACCGATTAGTAATGTACGT 606 Query 19884 ACACACCAAGAACGAAACGGAAAATATTGTCCACATCGTATGCT 19927 ||||| || | | ||||| |||| |||||||| ||||| Sbjct 607 ACACATAAATCGTGGAGTGGAAAGCATTGCCCACATCGAATGCT 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119729857841620