Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_012663.1 Length=60074 Score E Sequences producing significant alignments: (Bits) Value seq2763 89.7 2e-13 seq2232 89.7 2e-13 seq1 84.2 8e-12 >seq2763 Length=485 Score = 89.7 bits (98), Expect = 2e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 59730 TGCCGACTACAGGACTTGAACCTGTGACCTTCTGATTACAAATCAGACGCTCTACCAACT 59789 ||||||||| |||||||||||| |||| |||||||||| |||| |||||||||| | Sbjct 394 TGCCGACTAGAGGACTTGAACCCCCAACCTACTGATTACAAGTCAGTTGCTCTACCAATT 335 Query 59790 GAGCTAAATCGGCTAATTG 59808 ||||||| |||||||| || Sbjct 334 GAGCTAAGTCGGCTAAATG 316 >seq2232 Length=716 Score = 89.7 bits (98), Expect = 2e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 59730 TGCCGACTACAGGACTTGAACCTGTGACCTTCTGATTACAAATCAGACGCTCTACCAACT 59789 ||||||||| |||||||||||| |||| |||||||||| |||| |||||||||| | Sbjct 279 TGCCGACTAGAGGACTTGAACCCCCAACCTACTGATTACAAGTCAGTTGCTCTACCAATT 338 Query 59790 GAGCTAAATCGGCTAATTG 59808 ||||||| |||||||| || Sbjct 339 GAGCTAAGTCGGCTAAATG 357 >seq1 Length=1156483 Score = 84.2 bits (92), Expect = 8e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 59730 TGCCGACTACAGGACTTGAACCTGTGACCTTCTGATTACAAATCAGACGCTCTACCAACT 59789 ||||||||| |||||||||||| |||| |||||||||| |||| |||||||||| | Sbjct 1155766 TGCCGACTAGAGGACTTGAACCCCCAACCTACTGATTACAAGTCAGTTGCTCTACCAATT 1155825 Query 59790 GAGCTAAATCGGCT 59803 ||||||| |||||| Sbjct 1155826 GAGCTAAGTCGGCT 1155839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192102777951240