Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_012756.1 Length=31276 Score E Sequences producing significant alignments: (Bits) Value seq9 114 3e-21 >seq9 Length=252781 Score = 114 bits (126), Expect = 3e-21 Identities = 195/278 (70%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 8348 GTAGGTCGCTTGACTCGTGATCCTGAGTTACGATACACACCGTCAAATGTG--GCTGTTG 8405 || ||||| || ||| || ||||| ||||| ||||| || ||| ||| || || | Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCC--CAATGGTGTCGCAGTAG 22284 Query 8406 CGACTTTCAGTTTGGCAGTGAATCGCAATTTTAAGAATCAGGCAGGTGATCGTGAAGCTG 8465 | ||||| | || || ||||||||| ||| |||||| |||||| |||||||||| Sbjct 22285 CTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTG 22344 Query 8466 ATTTTATCAGTTGCATCATGTGGCGTCAACAGGCTGAAAACTTTGCAAATTGGCTTAAAA 8525 | ||||| | ||| | || |||||| |||| || |||||| | ||||||| | |||| Sbjct 22345 ACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAA 22404 Query 8526 AAGGT-GCTCTTGTAGGAATCACAGGCCGCATCCAGACTCGTAGCTATGATAATCAGCAA 8584 ||||| ||| | | ||| | || || | || ||||||| || || || | Sbjct 22405 AAGGTAGCT-TAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGAT 22463 Query 8585 GGCCAACGTGTCTATGTGACAGAAGTGGTAGCTGAAAG 8622 || ||||||| || || |||||||| | || ||||| Sbjct 22464 GGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAG 22501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99955136545420