Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_012884.1 Length=31147 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 2e-15 >seq9 Length=252781 Score = 95.1 bits (104), Expect = 2e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28494 GCAACTTTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCT 28553 || ||||||||| | || || || || ||| ||||| | ||||| ||||||||| Sbjct 22284 GCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCT 22343 Query 28554 GATTTCATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAA 28613 || || |||||| || || |||||| | ||||| ||||| |||| || | ||| Sbjct 22344 GACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAA 22403 Query 28614 AAAGGGACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAA 28673 ||||| | | |||| | ||| || |||| || || ||||| || ||| | Sbjct 22404 AAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGAT 22463 Query 28674 GGTCAGCGTGTTTACGTCACAGAAGTTGTTGCGGA 28708 ||| | ||||| ||||| ||||||||| ||||||| Sbjct 22464 GGTAAACGTGTATACGTAACAGAAGTTCTTGCGGA 22498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99542363236810