Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_013644.1 Length=37856 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 1e-14 >seq1 Length=1156483 Score = 93.3 bits (102), Expect = 1e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 37498 GGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAG 37557 ||||| ||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct 561963 GGACCCTTAGCTCAGCTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 561904 Query 37558 CCCTGTATGGTCCATA 37573 ||| | |||||||| Sbjct 561903 TCCTACAGGGTCCATA 561888 Score = 91.5 bits (100), Expect = 4e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 37497 AGGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGA 37556 |||||| ||||||||| ||||||||||| ||||||||||||||| ||||| |||||||| Sbjct 1156308 AGGACCTTTAGCTCAGCTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGA 1156249 Query 37557 GCCCTGTATGGTCCA 37571 | ||| | |||||| Sbjct 1156248 GTCCTACAAGGTCCA 1156234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121009775077620