Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq28 387 2e-102 seq21 170 2e-37 seq115 161 1e-34 seq168 156 5e-33 seq351 105 8e-18 >seq28 Length=145191 Score = 387 bits (428), Expect = 2e-102 Identities = 580/824 (70%), Gaps = 0/824 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 121799 TCACCGGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 121740 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | ||||| Sbjct 121739 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTCGGA 121680 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| ||| Sbjct 121679 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAG 121620 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || ||||| || ||||| |||||||| |||||||||||| |||| ||| Sbjct 121619 TCGCGAAGGACCTTCTCGACGGGTTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 121560 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || ||||| || ||||| || | || ||| | | ||| || || Sbjct 121559 TCGAAGCGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 121500 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | |||||||| || ||||| || || || || Sbjct 121499 TCGATGGTAGTCTGCGCGGCCGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 121440 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 121439 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 121380 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 121379 GCGACGAAGTGAGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 121320 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | |||||| | || | || ||||| ||||| Sbjct 121319 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 121260 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || ||||| ||||| |||||| | ||| || | | ||||| ||||| ||| Sbjct 121259 CCTCCTCCGAGATCAAAGATGAGGACGTTCTTCTCGCCGACGGTCTTCTTGTCGAGGCCG 121200 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||||||||| || ||| ||||| | || Sbjct 121199 TAAGCGATGGCGGCGGCGGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 121140 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 121139 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 121080 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | ||||| || | || ||| | || ||||| || || Sbjct 121079 ACGGCGTTGGAGACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTCAGCAGG 121020 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 | ||| ||||| || || || | | ||||| || || || || Sbjct 121019 ATCATGGATGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCC 120976 >seq21 Length=154194 Score = 170 bits (188), Expect = 2e-37 Identities = 524/807 (65%), Gaps = 15/807 (2%) Strand=Plus/Plus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 84475 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 84534 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| | | || || | || || | | || || || ||||| Sbjct 84535 CGACTTGTTCAACTGTCGGCCACCGAAGAACTCGGAAACGAGCGACTGGATCTTGGGGAT 84594 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 84595 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 84654 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 | || || ||||| || || | | | | ||||| | | | |||| Sbjct 84655 TTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 84713 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | ||||| ||||||| || || | |||| || || | | | | ||| || | | Sbjct 84714 CGAAACGAGCACGGGAGATCGAGGCGGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 84773 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 84774 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 84833 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| ||||||||||||| |||| || || ||| | || | | |||||| | Sbjct 84834 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 84893 Query 7431 CAGAGAAGTGT--CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| | || | | | | || || || |||||||||||||| || || || Sbjct 84894 TCTTGAAGTGCTCCAAAAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 84951 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 84952 AGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 85011 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACG---------TTCGTATCGTCGTCTTTGTTCTT 7599 || || || || || || ||||| ||| ||| || | || || || Sbjct 85012 TCCTCCTCCAAGATCGAAGATGAGAACGAGCTTCTCCTTCTTAGACTTCTCGGTGGCCTC 85071 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | | |||||||| ||||| || || || || || || || || ||||| || || || Sbjct 85072 ACCCAGACCGTAGGCGATGGCAGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 85131 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 85132 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 85191 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 85192 GACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 85251 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| ||| ||||| || || ||||| Sbjct 85252 CTTGGAAAGGACCATGGACGAGATCTC 85278 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 85532 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 85588 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 85589 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 85648 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 85649 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 85681 >seq115 Length=63387 Score = 161 bits (178), Expect = 1e-34 Identities = 248/353 (70%), Gaps = 3/353 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 21600 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 21659 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 21660 TCTTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 21719 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 21720 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCAGTGGGCTCG 21776 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | || || ||| |||||| || || || || | || || || |||||||||||| Sbjct 21777 TTGACAACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 21836 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 21837 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 21896 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | || ||| | || ||||| ||| | || ||| | || ||||| || Sbjct 21897 TAGGCCTCGGCGGTCTCCTTCATCTTGCCCAAAATCATGGCCGAGATCTCCTC 21949 >seq168 Length=48346 Score = 156 bits (172), Expect = 5e-33 Identities = 320/470 (68%), Gaps = 12/470 (3%) Strand=Plus/Minus Query 11218 GCGTGTACTTTGAGTATTTCTTCACGTCCGTGAACATCAGGTAAAGAAACTTGTATTTTA 11277 || |||||||| |||| ||||||| || | ||||| || | ||| |||| | Sbjct 36528 GCATGTACTTTCAGTACAGCTTCACGGCCATTTACATCTGGACGATCTACTGTAATTTGA 36469 Query 11278 CGATCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCA 11337 || ||||| | ||| || ||||||||||| ||| || || || ||||||||| ||| Sbjct 36468 CGGTCAAAACGACCTGGACGTAATAACGCTGGGTCAAGAATGTCTGGACGGTTTGTCGCA 36409 Query 11338 CCTATAACAACAAT---TTCAGTTTCATTCTCGAAACCATCCATTTCTGTTAATAATTGG 11394 | || | || ||| ||| || || |||| ||||||||||| | ||||||| Sbjct 36408 GCAATGATAATAATACCTTCGTTTGCAC---CGAATCCATCCATTTCAACAAGTAATTGG 36352 Query 11395 TTAATTGTTTGTTCACGCTCATCGTTTGCCGCAAACCCATTCATACTTCT--TTTCTTAC 11452 || | |||||| ||||||||||| | | || || | | | | | || || Sbjct 36351 TTCAATGTTTGCTCACGCTCATCATGACCACCA--CCAAGACCTGCGCCACGTTGACGAC 36294 Query 11453 CAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCAA 11512 | | |||||||||||||| || || || ||||| || ||||| ||| ||||| Sbjct 36293 CTACTGCATCAATTTCATCAATGAAAATGATACAAGGAGCATTTTTCTTTGCATTTTCAA 36234 Query 11513 ATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAA-CGATGACCCC 11571 ||| |||||| || | | ||| || || || |||||||| || ||||| | ||| | Sbjct 36233 ATAAATCACGTACACGTGATGCACCGACACCGACAAACATCTCTACGAAGTCAGAACCAC 36174 Query 11572 GAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTA 11631 | | ||| || |||||| || ||||| || | |||||||||||| | |||||| Sbjct 36173 TGATAGAGAA-GAATGGAACGCCAGCCTCACCTGCAACAGCACGTGCTAATAAAGTTTTA 36115 Query 11632 CCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||||||||||| || ||||| ||||| |||| || |||||| Sbjct 36114 CCTGTACCTGGAGGTCCAACTAATAGGACACCCTTTGGAATACGAGCACC 36065 >seq351 Length=21192 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||||| || || || || || || ||||| | ||| || || || Sbjct 13236 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTAATGACACGGAGCACGTCAAGA 13295 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || || | || || || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 13296 CCCGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 13355 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 13356 ACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 13415 Query 7781 TTG 7783 ||| Sbjct 13416 TTG 13418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635089571273800