Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_015252.1 Length=36953 Score E Sequences producing significant alignments: (Bits) Value seq9 217 3e-52 >seq9 Length=252781 Score = 217 bits (240), Expect = 3e-52 Identities = 236/313 (75%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 32040 TGATGAATCGAGTTGTTTTAGTGGGCCGTTTAACAAAGGACCCCGAATTGAAATATACAC 32099 |||||||||| ||| | | || || |||||||| |||||||| || || || || | Sbjct 22207 TGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGC 22266 Query 32100 CTGCAGGAGCAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAATCAGC 32159 | || | ||||| || || ||||| ||||||| ||||| | ||| | ||||||| Sbjct 22267 CCAATGGTGTCGCAGTAGCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGC 22326 Query 32160 AAGGTGAGCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAAAGCG 32219 ||||||||||||||||||| | ||||| ||||| | |||||||| || |||| || Sbjct 22327 AAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACG 22386 Query 32220 TAGCTAACTACTTGAAAAAAGGAAGTTTAGCAGGTGTTGATGGTCGATTACAAACACGTA 32279 |||| || || ||||||||||| || |||||||| || ||||| || | ||||| |||| Sbjct 22387 TAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTA 22446 Query 32280 ACTATGAAGGCAATGACGGTAAGCGTGTATATGTGACAGAGGTCATTGCGGAAAGTGTAC 32339 | || || || | || ||||| |||||||| || ||||| || |||||||||| || | Sbjct 22447 ATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGC 22506 Query 32340 AGTTCCTAGAGCC 32352 | || ||||||| Sbjct 22507 AATTTTTAGAGCC 22519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118120361917350