Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq1 105 8e-18 seq69 89.7 6e-13 >seq1 Length=1156483 Score = 105 bits (116), Expect = 8e-18 Identities = 117/157 (75%), Gaps = 13/157 (8%) Strand=Plus/Minus Query 140958 CAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAGTCCT 141017 || |||||||||||| ||||||| ||| ||| ||| ||| ||||| ||||||||||||| Sbjct 1155748 CATTAGCTCAGTTGG-TAGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCT 1155690 Query 141018 ACCTGGGTCGCCTT------------GCGGGTGTGGTGTAGCGGTAACATGCGAGCCTTC 141065 | ||| || || | |||||||| || ||| ||||| | |||||||| Sbjct 1155689 TCATGGCTCACCATTTACAATTTAATGCGGGTGTAGTTTAGTGGTAAAACAAGAGCCTTC 1155630 Query 141066 CAAGCTCTTGTCACGGGTTCGATCCCCGTCACCCGCT 141102 |||||||| ||| | ||||||| | | ||||||||| Sbjct 1155629 CAAGCTCTGGTCGAGAGTTCGATTCTCTTCACCCGCT 1155593 >seq69 Length=88854 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/107 (79%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 141253 ATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAA 141312 ||||| ||||||||||| || ||||| || ||||||| || |||||||||||| | Sbjct 88601 ATTCCGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAG 88542 Query 141313 TCCTACCTGGGGAG---TCATGCTTGCTTAGCTCAG-AGGTAGAGCA 141355 ||||||||| |||| | |||||| | |||||||| ||||||||| Sbjct 88541 TCCTACCTGCGGAGCCATTATGCTTCCATAGCTCAGCTGGTAGAGCA 88495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610355254867800