Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq12 140 4e-28 >seq12 Length=209919 Score = 140 bits (154), Expect = 4e-28 Identities = 203/287 (71%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 150944 TACCAGTAATGAGGGTGTCTGATTATACTGGTTCACCAGAAATTCTTGATGGAAGAGTAA 151003 ||| |||||| || | ||||| ||||||| || |||||| | ||||| | || | Sbjct 198934 TACAAGTAATTGGGATTTCTGAAGTAACTGGTTTCCCTGAAATTATGGATGGCCGTGTGA 198875 Query 151004 AGACTTTACATCCAAAGATTCATGGTGGTATTCTTGCACAACGAGGTAATTCTAGTCATG 151063 | || ||||||||||| |||||||||||| | | ||| || | |||| | |||| Sbjct 198874 AAACATTACATCCAAATATTCATGGTGGTCTATTAGCAGTTCGTGATAATGAAACACATG 198815 Query 151064 ATTTAGATCTTAAGGTAAATCGTATTGAACCGATTGATATTGTTGCTGTAAACCTATATC 151123 | | || | | |||| || || ||||| |||||| ||| ||| |||||| Sbjct 198814 TAACGCAAATGAATGAATTAGGTATGGAGCCAATTGACTTTGTTGTTGTTAACTTATATC 198755 Query 151124 CATTTAAAGAAACTGTTGCTAAACCAGGTGTAACTCTTGCAGAAGCAATTGAGAATATTG 151183 ||||||||||||| | ||||| || | |||||| |||| || |||||||| ||||||| Sbjct 198754 CATTTAAAGAAACAATCGCTAAGCCTGATGTAACATTTGCTGATGCAATTGAAAATATTG 198695 Query 151184 ACATTGGTGGTCCTAGTATGGTAAGATCAGCAGCAAAGAATTATAAA 151230 | || ||||| || | ||| | | || || || || ||| ||||| Sbjct 198694 ATATCGGTGGCCCGACAATGATTCGCTCTGCTGCGAAAAATCATAAA 198648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582808329908000