Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-11 >seq1 Length=1156483 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 ||| || ||| ||| | || || || || ||||| ||||| || || || || | ||| Sbjct 597271 GGTGAAACAGTAACGAAAGCTGTTATTACAGTACCTGCATACTTCAACGATGCAGAGCGT 597212 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 ||||| || ||||||||||| ||||| ||||| | | ||| ||||| || || || Sbjct 597211 CAAGCAACGAAAGATGCTGGTCGTATCGCTGGTTTAGAAGTTGAGCGTATCATTAACGAG 597152 Query 550502 CCTACTGCTGCTGCACTTGCATATGGACTTGATAAACA 550539 || || || || |||||||| || || | || ||||| Sbjct 597151 CCAACAGCAGCAGCACTTGCTTACGGTTTAGAAAAACA 597114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029008043843050