Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq4164 84.2 4e-11 seq325 84.2 4e-11 seq69 84.2 4e-11 seq16 84.2 4e-11 seq1 84.2 4e-11 >seq4164 Length=251 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| Sbjct 244 GCGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAAT 185 Query 133023 CCCTCCCCCGCATCCA 133038 || ||||||| ||| Sbjct 184 CCTGTCCCCGCAACCA 169 >seq325 Length=23210 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| Sbjct 22851 GCGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAAT 22792 Query 133023 CCCTCCCCCGCATCCA 133038 || ||||||| ||| Sbjct 22791 CCTGTCCCCGCAACCA 22776 >seq69 Length=88854 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| Sbjct 929 GCGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAAT 870 Query 133023 CCCTCCCCCGCATCCA 133038 || ||||||| ||| Sbjct 869 CCTGTCCCCGCAACCA 854 >seq16 Length=199848 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| Sbjct 640 GCGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAAT 699 Query 133023 CCCTCCCCCGCATCCA 133038 || ||||||| ||| Sbjct 700 CCTGTCCCCGCAACCA 715 >seq1 Length=1156483 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| Sbjct 1156092 GCGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAAT 1156033 Query 133023 CCCTCCCCCGCATCCA 133038 || ||||||| ||| Sbjct 1156032 CCTGTCCCCGCAACCA 1156017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895705431899400