Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20lychnidis-
dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters
Query= NC_019421.1
Length=48396
Score E
Sequences producing significant alignments: (Bits) Value
seq4 475 1e-129
>seq4
Length=425142
Score = 475 bits (526), Expect = 1e-129
Identities = 729/1030 (71%), Gaps = 12/1030 (1%)
Strand=Plus/Plus
Query 767 TTTATTGACACTATTAGATTGTTATTGGGATAATCCTGTTTGGTTTGCAGAGGATATGTT 826
||||| || | ||| ||| |||||||||| |||| ||| |||||| ||||||||| |
Sbjct 186977 TTTATGGAGATTATC-GATGTTTATTGGGATGATCCGGTTGCGTTTGCCGAGGATATGCT 187035
Query 827 AAATTTTAAAGCTGACAAGTGGCAATCTGATGTTCTGATGGCTTTAGCTCAAACCCCAAA 886
|||| | | || | ||||| | ||||| |||| ||| || |||| |||||
Sbjct 187036 GGGTTTTTATCCGGATGAATGGCAGAGAAAAGTTCTTATGGATTTGGCACAAAGTCCAAA 187095
Query 887 AGTATCTATTAGAAGTGGTCAAGGAGTAGGTAAAACTGGATTAGAAAGCATTGCAACTGT 946
|| ||| | | ||||||||| || |||||||| || | || ||| | | |
Sbjct 187096 GGTTTCTGTGCGTTCTGGTCAAGGGGTTGGTAAAACAGGTCTTGAGTCAGTTGTAGTTAT 187155
Query 947 ATGGTATTTAAGCACTAGACCTTTTCCGAAAGTAGTTGCTACAGCTCCAACACGACAACA 1006
|||| | || ||| || ||| ||||| || ||||||||| ||| ||||
Sbjct 187156 TTGGTTCCTCTGCTGTAGGCCGAATCCAAAAGTTATTTGTACAGCTCCTACAAAGGAACA 187215
Query 1007 ATTATATGACGTACTATGGGCTGAAATAGCTAAATGGCTA--AGTAATAGCAAGGTTGAG 1064
|||| | ||||| |||||||||||||| |||||| || || | ||| ||| |
Sbjct 187216 GTTATTTACTGTACTTTGGGCTGAAATAGCGAAATGGTTAGAAGGCAGTGCA--GTTAAA 187273
Query 1065 AAGCTACTTGAGTGGACTAAAACAAAAGTGTATATGAAAGGCTTTGAAGAAAGATGGTGG 1124
|| |||||| | |||||||||||| ||| || |||| ||| ||| ||| | ||||
Sbjct 187274 AATCTACTTAAATGGACTAAAACACGAGTATACATGATTGGCAGTGAGGAACGTTGGTTT 187333
Query 1125 GCTACAGCTAGAACAGCAGTAAAGCCCGAGAATATGCAAGGTTTTCATGAAGATTATATG 1184
||||| |||||||| ||| ||||| ||||| |||||||| ||||| ||||| ||||||
Sbjct 187334 GCTACTGCTAGAACGGCAACGAAGCCGGAGAACATGCAAGGATTTCACGAAGACTATATG 187393
Query 1185 TTATTTGTTGTTGATGAAGCTTCGGGAGTTGCTGACCCCATTATGGAAGCTATATTGGGA 1244
|||||||| |||||||||||| || | || || || ||||||||||||||| | ||
Sbjct 187394 TTATTTGTATGTGATGAAGCTTCTGGTATAGCAGATCCTATTATGGAAGCTATACTCGGT 187453
Query 1245 ACATTATCAGGTGCAGAAAATAAGCTTCTTTTATGCGGAAACCCAACTAGAACGAGTGGA 1304
|| ||||| |||||||||||||| | | ||||| ||||||||||| ||||| || ||
Sbjct 187454 ACTTTATCTGGTGCAGAAAATAAATTGTTCTTATGTGGAAACCCAACAAGAACAAGCGGT 187513
Query 1305 ACGTTTTACGATAGCCATAATAGAGACAGAGATTTATATAAAACATTTAAAGTATCTTCT 1364
||||| ||| |||||| | ||||||||||||||||||| | ||||||||||
Sbjct 187514 GTATTTTATGATTCTCATAATCGTGACAGAGATTTATATAAAATACATAAAGTATCTAGC 187573
Query 1365 TTAGATAGCCCTAGAACATCAAAAGATAATATTGAAATGCT-AAAAAGAAAGTACCATGA 1423
|||||||||||| |||| ||||| ||||| ||| | | ||||||||| || |||
Sbjct 187574 TTAGATAGCCCTCGAACCAGTAAAGACAATATAGAAGTATTGAAAAAGAAA-TATGGTGA 187632
Query 1424 AGGTTCTGACCCTTGGCGTGTTAGAGTTCTTGGAGAATTTCCAAAAGGTGAAAGTGATTC 1483
||||| ||| ||||||||| | || ||||| |||||||| |||| ||| ||| |
Sbjct 187633 GGGTTCAGACGTTTGGCGTGTACGTGTACTTGGTGAATTTCCTAAAGCAGAAGCAGATGC 187692
Query 1484 TTTAATATCTTTAGAAGCTGTTGAAACAAGCA-CAATAAGAGAAGTGAATATATCTAATG 1542
|| || | |||||| ||| | | |||||| || | ||||| | | | ||
Sbjct 187693 ATTTATCCCGTTAGAAATTGTAG-AGCAAGCAGCATCTTGTAAAGTGGA---GCCGACTG 187748
Query 1543 ACTATATATTAAATATAGGTGCAGATATAGCAAGATATGGTGACGATGAAACTATAATAG 1602
| | | | | |||||| || | ||| ||| |||||| |||||||| |||| |
Sbjct 187749 GTGAAACACTTGACTTAGGTGTTGACGTTGCACGATTTGGTGATGATGAAACCGTAATTG 187808
Query 1603 CTCCACGAATAGGTGGAAAAGTGTTTGATTTATTAACTTATTCTAAAAAAGACACAATGG 1662
||||| | ||||| ||||| ||| | ||||||| | | |||| |||| || ||||
Sbjct 187809 CTCCAAGGATAGGAAATAAAGTCTTTAAATTATTAAACCACTATAAACAAGATACTATGG 187868
Query 1663 AAACTGTAGGAAATATATTAAGAGCAGTTGATAAATTTAAAAGCATGTATCATCAAATCA 1722
|||||| || | |||| | | || | | ||| | | | ||| | || | |
Sbjct 187869 AAACTGCTGGCCACGTATTGAAATTAGCTAAGGAATACATAGCAAAGTACAAGCAGTTAA 187928
Query 1723 ACAGAGTAAAAATAAAAACGGATGATGATGGTTTGGGTGCAGGTGTTACAGACAGATTAA 1782
| ||||| | |||||| |||||| |||| | |||| |||||||| |||||||| |
Sbjct 187929 AAAGAGTTGATATAAAAGTCGATGATAGTGGTGTTGGTGGTGGTGTTACGGACAGATTGA 187988
Query 1783 AAGAGGTTAT 1792
|||| |||||
Sbjct 187989 AAGAAGTTAT 187998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154735594246220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |