Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 8e-15 >seq2 Length=633208 Score = 96.9 bits (106), Expect = 8e-15 Identities = 172/244 (70%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 48489 GCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAA-GAACT 48547 |||||| | |||| ||||||||| |||||||| ||| || ||| | | |||||| ||| | Sbjct 19152 GCTGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGT-ATTAAATGAAAT 19210 Query 48548 TAAAAAACGAGAAA-ATGTAATTT--TGTTCATTGATGAAGTACATATTATGATGGGTGC 48604 |||||| | ||| | | | ||| | |||||||||||| | |||| || | || || Sbjct 19211 TAAAAAGAGTGAAGGACGCATTTTATTATTCATTGATGAACTTCATACAATAGTTGGAGC 19270 Query 48605 TGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTCACG 48664 |||| | ||| | ||| | |||||| | ||||| | ||||| ||| |||| Sbjct 19271 TGGT-AAAACAGAA--GGAGCCATGGATGCAGGAAATATGTTAAAACCGATGCTTGCACG 19327 Query 48665 TGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGAAAA 48724 |||||| | | | ||| || || ||||| || ||||||||| | | ||||| || Sbjct 19328 TGGTGAACTGCATTGTATTGGAGCCACAACACTAGATGAATATCGCAAATATATTGAGAA 19387 Query 48725 AGAT 48728 |||| Sbjct 19388 AGAT 19391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106380409022840