Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq4101 84.2 3e-11 >seq4101 Length=257 Score = 84.2 bits (92), Expect = 3e-11 Identities = 116/163 (71%), Gaps = 16/163 (10%) Strand=Plus/Minus Query 198619 TTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCACTGGTTCGAATCCAGT 198678 ||||||||||||| ||||||| | ||| ||| | ||||| ||||||| ||| Sbjct 251 TTAGCTCAGTTGG-TAGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCTTC 193 Query 198679 ACGGCGCACCA--------------CGGGATGTGGTGAAATTGGCAGACACACTAGATTT 198724 | ||| ||||| |||| ||||| | ||||||||||| ||||||| || Sbjct 192 ATGGCTCACCATTTTAATTAATATGCGGG-TGTGGCGGAATTGGCAGACGCACTAGACTT 134 Query 198725 AGGTTCTAGCGCCATAGGCGTGACGGTTCGAGTCCGTCCATCC 198767 ||| ||||||||| | |||||| ||||||| ||| | || || Sbjct 133 AGGATCTAGCGCCTTTGGCGTGGGGGTTCGACTCCCTTCACCC 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741399135086600