Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_019912.1 Length=36932 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 1e-14 >seq3 Length=500241 Score = 93.3 bits (102), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 6663 TTTCATGTTGCTGTAGATGATAAAGAAGCAATTCAATTAATCCCATTCAACCGCAATGCG 6722 ||||||||||| |||||||| ||||||||| | ||| || | || | || ||||| Sbjct 382 TTTCATGTTGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTGATCGTAATGCT 441 Query 6723 TGGCACGCTGGAGACGGTGCAAACGGACGCGGTAACCGCCATTCAATCGGCGTTGAAATC 6782 ||||| || || || ||| |||||| ||||| || | || ||||| || ||||| Sbjct 442 TGGCATGCAGGTGATGGT---AACGGAAATGGTAATCGTAAATCTATCGGAGTGGAAATT 498 Query 6783 TGTTATTCAAAATCTGGTGGCCCGCGTTATGAACAAGCTGTACGA-AATGCAATCATTGT 6841 || ||||| | ||||| | ||| ||||| | | || |||||| ||||| Sbjct 499 TGCTATTCTCTAAGCGGTGGGGATAGATAT-TACAAGGCGGAGGATAATGCAGCAATTGT 557 Query 6842 TATTAGACAGTTAATGGATCAATTTAACATTCCGAT 6877 |||| ||||||||| | ||||| || || ||||| Sbjct 558 TATTGCTCAGTTAATGAAACAATTCAATATACCGAT 593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118053166262460