Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_019914.1 Length=40071 Score E Sequences producing significant alignments: (Bits) Value seq9 100 7e-17 >seq9 Length=252781 Score = 100 bits (110), Expect = 7e-17 Identities = 198/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 10824 GTAGGTCGTTTAACTAAAGATCCTGAATTTAGAAAAACTCAAAGTGGGGTTGATGTTGCA 10883 || |||||||||||||| || ||||| || | | || | | ||| || | || || Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGCT 22286 Query 10884 ACTTTTACACTAGCAGTTAACCGTACTTTCACGAATGCGCAAGGCGAACGTGAAGCAGAT 10943 |||||||| |||| || || || | || | ||| |||||| || |||||||| || Sbjct 22287 ACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGAC 22346 Query 10944 TTTATCAATATAGTCGTATTCAGAAAACAAGCACACAACGTTAACAACTATTTATCGAAA 11003 ||||| ||| || ||| | ||||||||| | ||||| || ||||| ||| Sbjct 22347 TTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAA 22406 Query 11004 GGAAAACTAGCAGGTGTTGATGGTCGCATCCAATCACGCAGTTATGAAAATCAAGAAGGT 11063 || | ||||||| || ||||| || | ||| | || | ||| || ||||| ||| Sbjct 22407 GGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGATGGT 22466 Query 11064 CGTCGAATATTTGTTACTGAAGTAGTTGCAGATAGTGTTCAATTTCTTGAACC 11116 || ||| || || ||||| |||| || || || |||||| | || || Sbjct 22467 AAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCC 22519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128097316771970