Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_020081.2 Length=149844 Score E Sequences producing significant alignments: (Bits) Value seq8 104 2e-17 seq361 87.8 2e-12 >seq8 Length=318055 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 105918 AAGATGTCAATGCGGTTTCCTTTAATTGCTCCGCCTGTATCTGCTGCGATGGCTTGTCCG 105977 ||||| ||||| ||||| ||||||||||| || || |||||| | ||||| |||| |||| Sbjct 28315 AAGATATCAATACGGTTACCTTTAATTGCACCACCAGTATCTCCAGCGATAGCTTCTCCG 28374 Query 105978 TACCCTTCAACGTATACTGTAGAGCCAAGTGGAATTACATTAGGGTCTACGGCAATGACT 106037 || ||||| || ||||| |||| || | ||| ||||| || ||||| || || || | | Sbjct 28375 TAACCTTCTACCCATACTTTAGATCCTAATGGGATTACTTTCGGGTCAACAGCGATCATT 28434 Query 106038 TT 106039 || Sbjct 28435 TT 28436 >seq361 Length=20807 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 105924 TCAATGCGGTTTCCTTTAATTGCTCCGCCTGTATCTGCTGCGATGGCTTGTCCGTACCCT 105983 ||||| || ||||||||||| || || || || ||| | || || |||| ||| || ||| Sbjct 1281 TCAATACGATTTCCTTTAATCGCACCACCGGTGTCTCCAGCAATCGCTTCTCCATATCCT 1222 Query 105984 TCAACGTATACTGTAGAGCCAAGTGGAATTACATTAGGGTCTACGGCAATGACTTT 106039 || || ||||| | || ||||| |||||||| || || || || ||||| ||||| Sbjct 1221 TCTACCCATACTTTTGATCCAAGCGGAATTACTTTCGGATCAACAGCAATTACTTT 1166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479340172688800