Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_020871.1 Length=133057 Score E Sequences producing significant alignments: (Bits) Value seq2489 84.2 2e-11 seq69 84.2 2e-11 seq16 82.4 6e-11 >seq2489 Length=589 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 28993 GCTGGTCTAGTTGGACTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 29052 ||||| |||| |||| |||||||| || || ||||| ||||| ||||||||||||||||| Sbjct 508 GCTGGGCTAGCTGGATTCGAACCAGCGCATGACGGAGTCAAAGTCCGTTGCCTTACCGCT 449 Query 29053 TGGTTACAGACCAATA 29068 ||| || || ||| || Sbjct 448 TGGCTATAGCCCATTA 433 >seq69 Length=88854 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 28993 GCTGGTCTAGTTGGACTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 29052 ||||| |||| |||| |||||||| || || ||||| ||||| ||||||||||||||||| Sbjct 88029 GCTGGGCTAGCTGGATTCGAACCAGCGCATGACGGAGTCAAAGTCCGTTGCCTTACCGCT 88088 Query 29053 TGGTTACAGACCAATAGTA 29071 ||| || || ||| || || Sbjct 88089 TGGCTATAGCCCATTAATA 88107 Score = 82.4 bits (90), Expect = 6e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 28993 GCTGGTCTAGTTGGACTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 29052 ||||| |||| |||| |||||||| || || ||||| ||||| ||||||||||||||||| Sbjct 615 GCTGGGCTAGCTGGATTCGAACCAGCGCATGACGGAGTCAAAGTCCGTTGCCTTACCGCT 674 Query 29053 TGGTTACAGACCA 29065 ||| || || ||| Sbjct 675 TGGCTATAGCCCA 687 >seq16 Length=199848 Score = 82.4 bits (90), Expect = 6e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 28993 GCTGGTCTAGTTGGACTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 29052 ||||| |||| |||| |||||||| || || ||||| ||||| ||||||||||||||||| Sbjct 1379 GCTGGGCTAGCTGGATTCGAACCAGCGCATGACGGAGTCAAAGTCCGTTGCCTTACCGCT 1320 Query 29053 TGGTTACAGACCA 29065 ||| || || ||| Sbjct 1319 TGGCTATAGCCCA 1307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425629352962610