Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_020883.1 Length=50861 Score E Sequences producing significant alignments: (Bits) Value seq9 147 7e-31 >seq9 Length=252781 Score = 147 bits (162), Expect = 7e-31 Identities = 211/295 (72%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 11743 GTTGGAAGATTGACAAGAGACCCGGAATTGAAATACACGCCTAACGGCGCTGCGGTTGCT 11802 ||||| | || || | ||||| || || |||||||| || || | || || ||| Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGCT 22286 Query 11803 ACTTTTACAATAGCGATCAACAGAACATTCACGAATCAAAGCGGAGAACGTGAAGCGGAC 11862 |||||||| |||| | || | |||| | ||||| || || |||||||| ||| Sbjct 22287 ACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGAC 22346 Query 11863 TTTATTAATTGTGTCGCATGGAGAAAACAAGCTGAAAACGTTGCAAACTTTCTGAAAAAA 11922 |||||||||||||| |||| | |||||||| |||||||| ||||| | | |||||||| Sbjct 22347 TTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAA 22406 Query 11923 GGATCGC-TCGCAGGGGTAGATGGAAAATTGCAGACGCGGAGTTATGAGAATCAGCACGG 11981 || | || | ||||| ||||||||| | || || || | ||| ||| || | || Sbjct 22407 GG-TAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGATGG 22465 Query 11982 GCAACGGGTATTTGTTACTGAAGTACAGGCGGATAGCGTTCAATTCTTAGAACCG 12036 |||| |||| || || ||||| | ||||| ||||| ||||| ||||| ||| Sbjct 22466 TAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCG 22520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162623084213070