Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq3539 87.8 2e-12 seq3015 86.0 7e-12 seq69 86.0 7e-12 seq4130 84.2 2e-11 seq325 84.2 2e-11 seq1 84.2 2e-11 >seq3539 Length=324 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/111 (78%), Gaps = 5/111 (5%) Strand=Plus/Minus Query 9740 GGTCGCAAGTTCAAATCTTGTCAGGG-GCTCCTTG----GGGAATTAGCTCAGTTGGTAG 9794 ||||||| ||||||||| |||| | | |||| ||| ||||||||| ||| || Sbjct 193 GGTCGCAGGTTCAAATCCTGTCTTCCCGATACTTGTTTGGGGCCTTAGCTCAGCTGGGAG 134 Query 9795 AGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGTCCGCTATTCTCCA 9845 ||||||||| ||||| |||||| ||||||||||||| |||||| ||||| Sbjct 133 AGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTAGGCTCCA 83 >seq3015 Length=428 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 9771 TTGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGA 9830 |||||| ||||||||| ||| ||||||||||| ||||| |||||| ||||||||||||| Sbjct 152 TTGGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGA 93 Query 9831 GTCCGCTATTCTCCA 9845 |||||| ||||| Sbjct 92 TCCCGCTAGGCTCCA 78 >seq69 Length=88854 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 9773 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 9832 |||| ||||||||| ||| ||||||||||| ||||| |||||| ||||||||||||| Sbjct 87858 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC 87799 Query 9833 CCGCTATTCTCCATC 9847 |||||| ||||||| Sbjct 87798 CCGCTAGGCTCCATC 87784 >seq4130 Length=254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 9772 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||| ||||||||| ||| ||||||||||| ||||| |||||| ||||||||||||| Sbjct 77 TGGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGAT 18 Query 9832 TCCGCTATTCTCCA 9845 |||||| ||||| Sbjct 17 CCCGCTAGGCTCCA 4 >seq325 Length=23210 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 9772 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||| ||||||||| ||| ||||||||||| ||||| |||||| ||||||||||||| Sbjct 23209 TGGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGAT 23150 Query 9832 TCCGCTATTCTCCA 9845 |||||| ||||| Sbjct 23149 CCCGCTAGGCTCCA 23136 >seq1 Length=1156483 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 9772 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||| ||||||||| ||| ||||||||||| ||||| |||||| ||||||||||||| Sbjct 1156482 TGGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGAT 1156423 Query 9832 TCCGCTATTCTCCA 9845 |||||| ||||| Sbjct 1156422 CCCGCTAGGCTCCA 1156409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549584991325400